Streptomyces phage Yasdnil
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Detailed Information for Phage Yasdnil
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByAdin Phetsavong
Year Found2018
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates33.211719 N, 97.149886 W Map
Discovery NotesFound in a soil sample that was dark, dry and had organic material (wood-chips, branches, etc.). Found on January 24th, 2018, at 11:32 AM, in an environment that was 59 degrees Fahrenheit.
Naming NotesI named the phage after an individual who was important to me, a lot of time was invested into the phage just as a lot of time was invested into that individual. Naming the phage after them seemed appropriate as it commemorates commitment and good memories.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2019
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage137
Genome length (bp)51631
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGCCAGTGAT
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Cluster Life CycleTemperate
Lysogeny NotesNo mesa. Could not proceed with lysogeny.
Other Cluster Members
Annotating InstitutionUniversity of North Texas
Annotation StatusIn GenBank
Plaque NotesClear, round plaques that were approximately 1mm in size.
Has been Phamerated?Yes
Gene List

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Yasdnil_1

Yasdnil_2
(HNH endonuclease)

Yasdnil_3

Yasdnil_4
(thioredoxin)

Yasdnil_5
(terminase small subunit)

Yasdnil_6
(terminase large subunit)

Yasdnil_7
(portal protein)

Yasdnil_8
(capsid maturation protease and MuF-like fusion protein)

Yasdnil_9
(scaffolding protein)

Yasdnil_10
(major capsid protein)

Yasdnil_11
(head-to-tail adaptor)

Yasdnil_12
(head-to-tail adaptor)

Yasdnil_13

Yasdnil_14
(head-to-tail adaptor)

Yasdnil_15
(major tail protein)

Yasdnil_16
(tail assembly chaperone)

Yasdnil_17
(tail assembly chaperone)

Yasdnil_18
(tape measure protein)

Yasdnil_19
(minor tail protein)

Yasdnil_20
(minor tail protein)

Yasdnil_21

Yasdnil_22

Yasdnil_23

Yasdnil_24

Yasdnil_25
(LysM-like endolysin)

Yasdnil_26

Yasdnil_27

Yasdnil_28
(immunity repressor)

Yasdnil_29

Yasdnil_30
(exonuclease)

Yasdnil_31

Yasdnil_32

Yasdnil_33

Yasdnil_34
(deoxycytidylate deaminase)

Yasdnil_35
(DnaB-like dsDNA helicase)

Yasdnil_36
(holliday junction resolvase)

Yasdnil_37

Yasdnil_38
(DNA primase)

Yasdnil_39
(DNA primase)

Yasdnil_40

Yasdnil_41

Yasdnil_42

Yasdnil_43
(exonuclease)

Yasdnil_44

Yasdnil_45
(helix-turn-helix DNA binding domain protein)

Yasdnil_46

Yasdnil_47
(ribonucleotide reductase)

Yasdnil_48
(methyltransferase)

Yasdnil_49

Yasdnil_50
(serine integrase)

Yasdnil_51
(ThyX-like thymidylate synthase)

Yasdnil_52

Yasdnil_53

Yasdnil_54
(DnaE-like DNA polymerase III)

Yasdnil_55

Yasdnil_56

Yasdnil_57

Yasdnil_58
(deoxynucleoside monophosphate kinase)

Yasdnil_59

Yasdnil_60

Yasdnil_61

Yasdnil_62

Yasdnil_63

Yasdnil_64

Yasdnil_65
(HNH endonuclease)

Yasdnil_66

Yasdnil_67

Yasdnil_68

Yasdnil_69

Yasdnil_70

Yasdnil_71

Yasdnil_72

Yasdnil_73
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN096379
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 75
Pitt Freezer Box Grid# G4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload