Detailed Information for Phage BartholomewSD |
Discovery Information |
Isolation Host | Streptomyces platensis MJ1A1 |
Found By | Quinn Fujii |
Year Found | 2015 |
Location Found | La Jolla, CA USA |
Finding Institution | University of California, San Diego |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 32.881200 N, 117.235000 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 16, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3397 |
Genome length (bp) | 52131 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCCACGTCTT |
GC Content | 67.6% |
Sequencing Notes | about 50% of the population contain a 1373 bp insert from 49167 - 50540 bp (inclusive) |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of California, San Diego |
Annotation Status | In GenBank |
Plaque Notes | Clear Plaques about 3-5mm in diameter |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK460245 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
1.5*10^10 PFU/mL |
Available Files |
GenBank File for Phamerator | Download |