Streptomyces phage Indigo
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Detailed Information for Phage Indigo
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByAshley Gassner
Year Found2017
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates33.207612 N, 97.149923 W Map
Discovery NotesThe soil sample was taken around 3:00 AM January 18, 2017. The temperature was 40 degrees Celsius. The sample was moist, packed, and clay-like. I dug about an inch to get to the soil.
Naming NotesI named it Indigo because i like the color indigo.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 9, 2017
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)49558
Character of genome endsUnknown
Overhang Length11 bases
Overhang SequenceCGGGCAGTGAT
GC Content66.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of North Texas
Annotation StatusIn GenBank
Plaque NotesClear and around 1 millimeter wide.
Has been Phamerated?Yes
Gene List

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Indigo_1

Indigo_2
(HNH endonuclease)

Indigo_3

Indigo_4
(thioredoxin)

Indigo_5
(terminase small subunit)

Indigo_6
(terminase large subunit)

Indigo_7
(portal protein)

Indigo_8
(capsid maturation protease)

Indigo_9
(scaffolding protein)

Indigo_10
(major capsid protein)

Indigo_11
(head-to-tail connector complex protein)

Indigo_12
(head-to-tail connector complex protein)

Indigo_13

Indigo_14

Indigo_15
(major tail protein)

Indigo_16
(tail assembly chaperone)

Indigo_17
(tail assembly chaperone)

Indigo_18
(tape measure protein)

Indigo_19
(minor tail protein)

Indigo_20
(minor tail protein)

Indigo_21

Indigo_22

Indigo_23

Indigo_24

Indigo_25
(LysM-like endolysin)

Indigo_26

Indigo_27

Indigo_28
(immunity repressor)

Indigo_29

Indigo_30
(exonuclease)

Indigo_31

Indigo_32

Indigo_33
(deoxycytidylate deaminase)

Indigo_34
(DnaB-like dsDNA helicase)

Indigo_35
(holliday junction resolvase)

Indigo_36

Indigo_37
(DNA primase)

Indigo_38
(DNA primase)

Indigo_39

Indigo_40

Indigo_41

Indigo_42
(endonuclease)

Indigo_43

Indigo_44
(helix-turn-helix DNA binding domain protein)

Indigo_45

Indigo_46
(ribonucleotide reductase)

Indigo_47
(Lsr2-like DNA bridging protein)

Indigo_48
(integrase)

Indigo_49
(ThyX-like thymidylate synthase)

Indigo_50

Indigo_51

Indigo_52
(DnaE-like DNA polymerase III (alpha))

Indigo_53

Indigo_54

Indigo_55

Indigo_56
(deoxynucleoside monophosphate kinase)

Indigo_57

Indigo_58

Indigo_59

Indigo_60

Indigo_61

Indigo_62

Indigo_63
(HNH endonuclease)

Indigo_64

Indigo_65
(DNA methylase)

Indigo_66

Indigo_67

Indigo_68

Indigo_69

Indigo_70

Indigo_71

Indigo_72
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK433271
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 70
Pitt Freezer Box Grid# C2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload