Detailed Information for Phage Hippo |
Discovery Information |
Isolation Host | Streptomyces lividans JI 1326 |
Found By | Mandy Feenstra and Rylan Gottron |
Year Found | 2019 |
Location Found | St. Louis, MO United States |
Finding Institution | Washington University in St. Louis |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 28°C |
GPS Coordinates | 38.634444 N, 90.292222 W Map |
Discovery Notes | Collected at St. Louis Zoo by the Hippo Enclosure Soil is wet and claylike Lots of organic matter, detritus Collected 2 cm deep |
Naming Notes | Named "Hippo" after the location the phage was found (hippo enclosure at St. Louis Zoo) |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 15, 2020 |
Sequencing Facility | The McDonnell Genome Institute at Washington University |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 93 |
Genome length (bp) | 51566 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGCCAGTGAT |
GC Content | 65.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Washington University in St. Louis |
Annotation Status | In GenBank |
Plaque Notes | Clear, uniform and medium sized plaques |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW365951 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
3.7 x 10^10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |