Streptomyces phage Pablito
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Detailed Information for Phage Pablito
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByVéronique Ongenae
Year Found2021
Location FoundLeiden, Netherlands
ProgramUnavailable
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates4.580278 N, 52.391944 W Map
Discovery NotesInstitutions name: Institute of Biology; Leiden University
Naming NotesMy cat is called Pablo, so this phage is the small version of him.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 29, 2021
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage88496
Genome length (bp)49492
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGCCGTGTCTT
GC Content66.4%
Sequencing NotesThere were a few SNPs in the sequenced population:
At position 10580, ~30% of reads say T instead of consensus C.
At position 19339, ~30% of reads say G instead of consensus A.
At position 20227, ~30% of reads say G instead of consensus A.
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusPlanless
Plaque NotesClear plaques
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives