Gordonia phage Diabla
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Detailed Information for Phage Diabla
Discovery Information
Isolation HostGordonia terrae 3612
Found ByHailey Doherty
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4607 N, 79.9227 W Map
Discovery NotesThe area was dry and rocky with mulch around. There was limited vegetation surrounding, and the collection spot was right by a sidewalk in front of a Target.
Naming Notes"She devil." Enough said.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage837
Genome length (bp)77117
Character of genome endsDirect Terminal Repeat
GC Content59.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSmaller plaques, more turbid in appearance, bullseye.
Number of Genes110
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Diabla_1

Diabla_2

Diabla_3

Diabla_4
(DNA binding protein)

Diabla_5

Diabla_6

Diabla_7
(DNA primase)

Diabla_8
(terminase small subunit)

Diabla_9
(terminase large subunit)

Diabla_10
(portal protein)

Diabla_11
(glycoside hydrolase)

Diabla_12

Diabla_13
(capsid maturation protease)

Diabla_14
(capsid decoration protein)

Diabla_15
(major capsid protein)

Diabla_16

Diabla_17

Diabla_18
(head-to-tail adaptor)

Diabla_19

Diabla_20

Diabla_21

Diabla_22
(major tail protein)

Diabla_23 — tRNA
(tRNA-Asn(gtt))

Diabla_24
(tail assembly chaperone)

Diabla_25
(tail assembly chaperone)

Diabla_26
(tape measure protein)

Diabla_27
(minor tail protein)

Diabla_28
(minor tail protein)

Diabla_29
(minor tail protein)

Diabla_30

Diabla_31

Diabla_32

Diabla_33

Diabla_34

Diabla_35

Diabla_36

Diabla_37
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Diabla_38
(lysin A, protease M23 domain)

Diabla_39

Diabla_40

Diabla_41

Diabla_42

Diabla_43
(Cas4 family exonuclease)

Diabla_44
(WhiB family transcription factor)

Diabla_45

Diabla_46

Diabla_47

Diabla_48

Diabla_49

Diabla_50
(DNA methylase)

Diabla_51

Diabla_52

Diabla_53
(lysin B)

Diabla_54
(MazG-like nucleotide pyrophosphohydrolase)

Diabla_55
(RusA-like resolvase)

Diabla_56
(nucleoside deoxyribosyltransferase)

Diabla_57
(DNA polymerase III sliding clamp)

Diabla_58

Diabla_59

Diabla_60
(DnaQ-like DNA polymerase III)

Diabla_61
(helix-turn-helix DNA binding domain protein)

Diabla_62

Diabla_63
(DNA helicase)

Diabla_64

Diabla_65

Diabla_66

Diabla_67
(helix-turn-helix DNA binding domain protein)

Diabla_68

Diabla_69

Diabla_70

Diabla_71

Diabla_72

Diabla_73

Diabla_74

Diabla_75

Diabla_76

Diabla_77

Diabla_78

Diabla_79

Diabla_80

Diabla_81

Diabla_82

Diabla_83

Diabla_84

Diabla_85

Diabla_86

Diabla_87

Diabla_88
(HNH endonuclease)

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Diabla_90

Diabla_91

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Diabla_93

Diabla_94
(AAA-ATPase)

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Diabla_96

Diabla_97

Diabla_98

Diabla_99

Diabla_100

Diabla_101

Diabla_102

Diabla_103

Diabla_104

Diabla_105

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Diabla_107

Diabla_108

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Diabla_110

Diabla_111

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889379
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 114
Pitt Freezer Box Grid# B2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload