Gordonia phage Eggsie
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Detailed Information for Phage Eggsie
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJeanelle Higginbotham
Year Found2017
Location FoundHouma, KY USA
Finding InstitutionUniversity of Louisiana at Monroe
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.629758 N, 90.744629 W Map
Discovery NotesIn a compost bin
Naming NotesEggshells were by the bin
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 20, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage159
Genome length (bp)74934
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length192 bp
GC Content59.0%
Sequencing NotesThis phage was sequenced as part of a DOGEMS mixed sample.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Louisiana at Monroe
Annotation StatusIn GenBank
Plaque Notesreally small, tiny plaques
Number of Genes102
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Eggsie_1

Eggsie_2

Eggsie_3

Eggsie_4
(DNA binding protein)

Eggsie_5

Eggsie_6

Eggsie_7

Eggsie_8
(DNA primase)

Eggsie_9
(Terminase small subunit)

Eggsie_10
(Terminase large subunit)

Eggsie_11
(Portal protein)

Eggsie_12
(Minor tail protein)

Eggsie_13

Eggsie_14
(Capsid maturation protease)

Eggsie_15
(Capsid decoration protein)

Eggsie_16
(Major capsid protein)

Eggsie_17

Eggsie_18

Eggsie_19
(Head-to-tail-adaptor)

Eggsie_20

Eggsie_21

Eggsie_22

Eggsie_23
(Major tail protein)

Eggsie_24 — tRNA
(tRNA-Asn(gtt))

Eggsie_26
(Tail assembly chaperone)

Eggsie_25
(Tail assembly chaperone)

Eggsie_27
(Tape measure protein)

Eggsie_28
(Minor tail protein)

Eggsie_29
(Minor tail protein)

Eggsie_30
(Minor tail protein)

Eggsie_31

Eggsie_32

Eggsie_33

Eggsie_34
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Eggsie_35
(Lysin A, protease M23 domain)

Eggsie_36

Eggsie_37

Eggsie_38

Eggsie_39

Eggsie_40
(Cas4 family exonuclease)

Eggsie_41

Eggsie_42

Eggsie_43

Eggsie_44

Eggsie_45
(DNA methylase)

Eggsie_46

Eggsie_47

Eggsie_48
(Lysin B)

Eggsie_49
(MazG-like nucleotide pyrophosphohydrolase)

Eggsie_50
(RusA-like holiday junction resolvase)

Eggsie_51
(nucleoside deoxyribosyltransferase)

Eggsie_52
(DNA polymerase III sliding clamp)

Eggsie_53

Eggsie_54
(DnaQ-like (DNA polymerase III subunit))

Eggsie_55
(Helix-turn-helix DNA binding domain)

Eggsie_56

Eggsie_57
(DNA helicase)

Eggsie_58

Eggsie_59

Eggsie_60

Eggsie_61
(Helix-turn-helix DNA binding domain)

Eggsie_62

Eggsie_63

Eggsie_64

Eggsie_65

Eggsie_66

Eggsie_67

Eggsie_68

Eggsie_69

Eggsie_70

Eggsie_71

Eggsie_72

Eggsie_73

Eggsie_74

Eggsie_75

Eggsie_76

Eggsie_77

Eggsie_78

Eggsie_79

Eggsie_80
(HNH endonuclease)

Eggsie_81

Eggsie_82

Eggsie_83

Eggsie_84

Eggsie_85

Eggsie_86
(ASCE ATPase)

Eggsie_87

Eggsie_88

Eggsie_89

Eggsie_90

Eggsie_91

Eggsie_92

Eggsie_93

Eggsie_94

Eggsie_95

Eggsie_96

Eggsie_97

Eggsie_98

Eggsie_99

Eggsie_100

Eggsie_101

Eggsie_102

Eggsie_103

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV105561
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 59
Pitt Freezer Box Grid# C7
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload