Detailed Information for Phage Goby |
Discovery Information |
Isolation Host | Streptomyces toxytricini NRRL B-5426 |
Duplicates of this Phage | Deema |
Found By | Hessah alzaid |
Year Found | 2016 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.212158 N, 97.148994 W Map |
Discovery Notes | I collected the soil in Winter at 21C. It is wet. |
Naming Notes | I named this phage Goby as my father nickname. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 26, 2016 |
Sequencing Facility | University of North Texas Health Science Center |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 42909 |
Genome length (bp) | 51393 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGCCAGTCAT |
GC Content | 65.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | the plaque is circle and clear. |
Morphotype | Siphoviridae |
Number of Genes | 76 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH171097 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4x10^9 pfu/mL |
Pitt Freezer Box# |
36 |
Pitt Freezer Box Grid# |
E7 |
Available Files |
GenBank File for Phamerator | Download |