| Detailed Information for Phage John316 |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Samantha Blum |
| Year Found | 2019 |
| Location Found | Rock Valley, IA United States |
| Finding Institution | Northwestern College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 43.207134 N, 96.293091 W Map |
| Discovery Notes | The soil was taken from a flower garden right before frost. |
| Naming Notes | "For God so loved the world that he gave his one and only Son, that whoever believes in him shall not perish but have eternal life."- John 3:16
It is a cliche Bible verse, but most Christians find this verse to be at the root of their faith. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 21, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 473 |
| Genome length (bp) | 77221 |
| Character of genome ends | Direct Terminal Repeat |
| GC Content | 59.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Northwestern College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are small and have rough edges. They are not turbid. The plaques do not increase in size after a longer incubation period. |
| Morphotype | Siphoviridae |
| Number of Genes | 109 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN945905 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
173 |
| Pitt Freezer Box Grid# |
A2 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
