Detailed Information for Phage Maneekul |
Discovery Information |
Isolation Host | Streptomyces xanthochromogenes NRRL B-5410 |
Found By | Jindanuch Maneekul |
Year Found | 2016 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.212624 N, 97.146247 W Map |
Discovery Notes | Soil was collected on 9/12/16 at 8:02 am. It was moist soil, fine, and brown. The temperature was 23 degree Celsius with 91% humidity. |
Naming Notes | I named the discovered phage after my family name. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 7, 2017 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 150 |
Genome length (bp) | 51612 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGCCAGTGAT |
GC Content | 65.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | The average diameter is 3 mm. They are all circular. The plaques are also clear. |
Morphotype | Siphoviridae |
Number of Genes | 73 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH171095 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.6x10^9 pfu/ml |
Date of SEA Lysate Titering |
Nov 10, 2016 |
Pitt Freezer Box# |
36 |
Pitt Freezer Box Grid# |
F8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |