| Detailed Information for Phage Pablito |
| Discovery Information |
| Isolation Host | Streptomyces lividans JI 1326 |
| Found By | Véronique Ongenae |
| Year Found | 2021 |
| Location Found | Leiden, Netherlands |
| Program | Unavailable |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 30°C |
| GPS Coordinates | 52.391934 N, 4.580278 E Map |
| Discovery Notes | Institutions name: Institute of Biology; Leiden University |
| Naming Notes | My cat is called Pablo, so this phage is the small version of him. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 29, 2021 |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 88496 |
| Genome length (bp) | 49492 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGCCGTGTCTT |
| End Determination Notes | The file of Pablito in Phamerator has been modified to be compatible with norms (added gene numbers/ removed "putative"). |
| GC Content | 66.4% |
| Sequencing Notes | There were a few SNPs in the sequenced population:
At position 10580, ~30% of reads say T instead of consensus C.
At position 19339, ~30% of reads say G instead of consensus A.
At position 20227, ~30% of reads say G instead of consensus A. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BD |
| Subcluster | BD2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Clear plaques |
| Number of Genes | 76 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OK412919 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Ignore |
| Available Files |
| GenBank File for Phamerator | Download |