Detailed Information for Phage Paolo |
Discovery Information |
Isolation Host | Streptomyces baarnensis NRRL B-2842 |
Found By | Daniel Schonfeld |
Year Found | 2023 |
Location Found | Frisco, TX United States |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.21674 N, 96.86729 W Map |
Discovery Notes | My soil sample was collected on January 22, 2023. The temperature of the location was at 39 degrees F and the humidity level was at 76%. The 2 inches worth of soil that I used for the sample was dry and came out in chunks. |
Naming Notes | I chose the name “Paolo” because it’s the name of my favorite bass guitar player. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 5, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2486 |
Genome length (bp) | 51580 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGCTACGTCTT |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | The plaques had a slight halo look to them and measured to and average diameter of .6mm. |
Morphotype | Siphoviridae |
Number of Genes | 83 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978823 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
2x10^9 |
Pitt Freezer Box# |
174 |
Pitt Freezer Box Grid# |
F7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |