Gordonia phage PierreThree
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Detailed Information for Phage PierreThree
Discovery Information
Isolation HostGordonia terrae 3612
Found ByT. Prasanna, J. Cheng, A. Hicks, N. Kotha
Year Found2022
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.442809 N, 79.965674 W Map
Discovery NotesNo comment.
Naming NotesPierre is a nice name. When we looked at our phage, all we could see was "Pierre". However, "Pierre" was taken, so we added "Three" at the end to symbolize the three rounds of purification Pierre went through.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 18, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage899
Genome length (bp)77360
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes106
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PierreThree_1

PierreThree_2

PierreThree_3

PierreThree_4

PierreThree_5

PierreThree_6

PierreThree_7

PierreThree_8
(DNA primase)

PierreThree_9

PierreThree_10
(terminase)

PierreThree_11
(portal protein)

PierreThree_12
(minor tail protein)

PierreThree_13

PierreThree_14
(capsid maturation protease)

PierreThree_15
(capsid decoration protein)

PierreThree_16
(major capsid protein)

PierreThree_17

PierreThree_18

PierreThree_19

PierreThree_20

PierreThree_21

PierreThree_22

PierreThree_23
(major tail protein)

PierreThree_24 — tRNA
(tRNA-Asn(gtt))

PierreThree_25
(tail assembly chaperone)

PierreThree_26
(tail assembly chaperone)

PierreThree_27
(tape measure protein)

PierreThree_28
(minor tail protein)

PierreThree_29
(minor tail protein)

PierreThree_30
(minor tail protein)

PierreThree_31

PierreThree_32

PierreThree_33

PierreThree_34
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

PierreThree_35
(lysin A, protease M23 domain)

PierreThree_36

PierreThree_37

PierreThree_38

PierreThree_39

PierreThree_40
(Cas4 exonuclease)

PierreThree_41

PierreThree_42

PierreThree_43

PierreThree_44

PierreThree_45

PierreThree_46
(DNA methyltransferase)

PierreThree_47

PierreThree_48

PierreThree_49

PierreThree_50
(lysin B)

PierreThree_51
(MazG-like nucleotide pyrophosphohydrolase)

PierreThree_52
(RusA-like resolvase)

PierreThree_53

PierreThree_54
(DNA polymerase III sliding clamp beta)

PierreThree_55
(DnaQ-like DNA polymerase III subunit)

PierreThree_56
(helix-turn-helix DNA binding domain protein)

PierreThree_57

PierreThree_58
(DNA helicase)

PierreThree_59

PierreThree_60

PierreThree_61

PierreThree_62
(DNA binding protein)

PierreThree_63

PierreThree_64

PierreThree_65

PierreThree_66

PierreThree_67

PierreThree_68

PierreThree_69

PierreThree_70

PierreThree_71

PierreThree_72

PierreThree_73

PierreThree_74

PierreThree_75

PierreThree_76

PierreThree_77

PierreThree_78

PierreThree_79

PierreThree_80

PierreThree_81

PierreThree_82
(HNH endonuclease)

PierreThree_83

PierreThree_84

PierreThree_85

PierreThree_86

PierreThree_87

PierreThree_88
(CobT-like cobalamin biosynthesis protein)

PierreThree_89
(AAA-ATPase)

PierreThree_90

PierreThree_91

PierreThree_92

PierreThree_93

PierreThree_94

PierreThree_95

PierreThree_96

PierreThree_97

PierreThree_98

PierreThree_99

PierreThree_100

PierreThree_101

PierreThree_102

PierreThree_103

PierreThree_104

PierreThree_105

PierreThree_106

PierreThree_107

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP208919
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 159
Pitt Freezer Box Grid# G8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload