Arthrobacter phage Pixelle
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Detailed Information for Phage Pixelle
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found BySabrina Gregoire
Year Found2020
Location FoundEmbrun, Canada
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature13°C
GPS Coordinates45.255833 N, 75.300278 W Map
Discovery NotesEnvironmental sample is from a garden.
Soil was dark and humid.
Naming NotesThe day I discovered this bacteriophage I lost my dog named Pixelle. Therefore, I decided to name this bacteriophage in honor of her.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 17, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage539
Genome length (bp)44348
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAGGGGCAT
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
SubclusterAZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Ottawa
Annotation StatusIn GenBank
Plaque NotesMedium to big plaques.
Bullseye in the middle of the plaques.
Number of Genes68
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Pixelle_1
(terminase small subunit)

Pixelle_2
(terminase large subunit)

Pixelle_3
(portal protein)

Pixelle_4
(capsid maturation protease and VIP2-like ADP-ribosyltransferase toxin)

Pixelle_5

Pixelle_6
(scaffolding protein)

Pixelle_7
(major capsid protein)

Pixelle_8
(head-to-tail adaptor)

Pixelle_9

Pixelle_10
(head-to-tail stopper)

Pixelle_11

Pixelle_12
(tail terminator)

Pixelle_13
(major tail protein)

Pixelle_14
(tail assembly chaperone)

Pixelle_15
(tail assembly chaperone)

Pixelle_16
(tape measure protein)

Pixelle_17
(minor tail protein)

Pixelle_18
(minor tail protein)

Pixelle_19
(minor tail protein)

Pixelle_20
(minor tail protein)

Pixelle_21

Pixelle_22

Pixelle_23

Pixelle_24
(endolysin)

Pixelle_25
(deoxynucleoside monophosphate kinase)

Pixelle_26

Pixelle_27
(exonuclease)

Pixelle_28
(nucleoside deoxyribosyltransferase)

Pixelle_29
(LAGLIDADG endonuclease)

Pixelle_30
(recombination directionality factor)

Pixelle_31

Pixelle_32

Pixelle_33
(NrdH-like glutaredoxin)

Pixelle_34

Pixelle_35
(Holliday junction resolvase)

Pixelle_36

Pixelle_37

Pixelle_38
(DNA primase/helicase)

Pixelle_39

Pixelle_40

Pixelle_41
(DNA polymerase I)

Pixelle_42

Pixelle_43
(DNA ligase)

Pixelle_44

Pixelle_45
(DNA binding protein)

Pixelle_46
(helix-turn-helix DNA binding protein)

Pixelle_47
(DNA binding protein)

Pixelle_48
(DNA methyltransferase)

Pixelle_49
(SprT-like protease)

Pixelle_50

Pixelle_51

Pixelle_52
(serine integrase)

Pixelle_53

Pixelle_54
(RNA binding protein)

Pixelle_55
(RNA binding protein)

Pixelle_56

Pixelle_57

Pixelle_58

Pixelle_59

Pixelle_60

Pixelle_61

Pixelle_62

Pixelle_63

Pixelle_64

Pixelle_65

Pixelle_66

Pixelle_67

Pixelle_68
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ114739
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 128
Pitt Freezer Box Grid# F11
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload