Detailed Information for Phage Pixelle |
Discovery Information |
Isolation Host | Arthrobacter globiformis NRRL B-2880 |
Found By | Sabrina Gregoire |
Year Found | 2020 |
Location Found | Embrun, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 13°C |
GPS Coordinates | 45.255833 N, 75.300278 W Map |
Discovery Notes | Environmental sample is from a garden. Soil was dark and humid. |
Naming Notes | The day I discovered this bacteriophage I lost my dog named Pixelle. Therefore, I decided to name this bacteriophage in honor of her. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 17, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 539 |
Genome length (bp) | 44348 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGGGGCAT |
GC Content | 67.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Ottawa |
Annotation Status | In GenBank |
Plaque Notes | Medium to big plaques. Bullseye in the middle of the plaques. |
Number of Genes | 68 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ114739 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
128 |
Pitt Freezer Box Grid# |
F11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |