Detailed Information for Phage Provolone |
Discovery Information |
Isolation Host | Streptomyces bicolor NRRL B-3897 |
Found By | Ioana Rotaru |
Year Found | 2022 |
Location Found | Denton, TX United States |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.18371 N, 97.10242 W Map |
Discovery Notes | Soil was collected near a tree at my apartment in southern Denton at the coordinates 33.18371° N, 97.10242° W. I used a small shovel to dig around 1 1/2 in into the ground, then placed the soil inside a ziplock bag. The temperature outside was 79° F, and it was fairly humid and cloudy, however the soil was dry. |
Naming Notes | This phage was named after a type of cheese I ate on the day of collection. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 11, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1901 |
Genome length (bp) | 49042 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGTACGTGAT |
GC Content | 65.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | Clear, circular plaques of around 1mm in diameter. |
Number of Genes | 77 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OQ995429 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4x10^8 |
Pitt Freezer Box# |
163 |
Pitt Freezer Box Grid# |
B9 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |