| Detailed Information for Phage Saftant |
| Discovery Information |
| Isolation Host | Streptomyces griseofuscus ATCC 23916 |
| Found By | Forrest Whiting and Nitan Shalon |
| Year Found | 2018 |
| Location Found | St. Louis, MO USA |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 32°C |
| GPS Coordinates | 38.690221 N, 90.486648 W Map |
| Discovery Notes | obtained from a reddish ant hill 3cm below ground
temperature was 32 C
54% humidity |
| Naming Notes | safta- Hebrew for grandmother
ant- found inside an ant hill |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2019 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 253 |
| Genome length (bp) | 48883 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGTTCCGTGAT |
| GC Content | 65.6% |
| Sequencing Notes | at position 20342 bp approximately 35% of reads contain a C instead of consensus T
at position 47615 bp approximately 35% of reads contain a C instead of consensus T
at position 47817 bp approximately 42% of reads contain A instead of consensus G |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BD |
| Subcluster | BD3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | large and clear plaque formation
3-5mm in diameter |
| Number of Genes | 74 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN204498 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
