Gordonia phage Teech
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Detailed Information for Phage Teech
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAnthony Zygmunt, David Ferraro
Year Found2021
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.441667 N, 79.96 W Map
Naming NotesCame from our nickname for our instructor for the program.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 5, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage426
Genome length (bp)75003
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length1172 bp
GC Content59.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Lagos
Annotation StatusIn GenBank
Number of Genes100
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Teech_1

Teech_2

Teech_3
(DNA helicase)

Teech_4

Teech_5

Teech_6

Teech_7

Teech_8
(DNA primase)

Teech_9

Teech_10
(terminase)

Teech_11
(portal protein)

Teech_12
(minor tail protein)

Teech_13

Teech_14
(capsid maturation protease)

Teech_15
(capsid decoration protein)

Teech_16
(major capsid protein)

Teech_17

Teech_18

Teech_19
(head-to-tail adaptor)

Teech_20

Teech_21

Teech_22

Teech_23
(major tail protein)

Teech_24
(tail assembly chaperone)

Teech_25
(tail assembly chaperone)

Teech_26
(tape measure protein)

Teech_27
(minor tail protein)

Teech_28
(minor tail protein)

Teech_29
(minor tail protein)

Teech_30

Teech_31
(holin)

Teech_32

Teech_33
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Teech_34
(lysin A, protease M23 domain)

Teech_35

Teech_36

Teech_37

Teech_38

Teech_39
(Cas4 family exonuclease)

Teech_40
(WhiB family transcription factor)

Teech_41

Teech_42

Teech_43
(DNA methyltransferase)

Teech_44

Teech_45
(lysin B)

Teech_46
(MazG-like nucleotide pyrophosphohydrolase)

Teech_47

Teech_48
(RusA-like Holliday junction resolvase)

Teech_49
(nucleoside deoxyribosyltransferase)

Teech_50

Teech_51
(DNA polymerase III sliding clamp (beta))

Teech_52

Teech_53
(DnaQ-like DNA polymerase III subunit)

Teech_54
(helix-turn-helix DNA binding domain)

Teech_55

Teech_56

Teech_57

Teech_58
(DNA helicase)

Teech_59

Teech_60

Teech_61
(helix-turn-helix DNA binding domain)

Teech_62

Teech_63

Teech_64

Teech_65

Teech_66

Teech_67

Teech_68

Teech_69

Teech_70

Teech_71

Teech_72

Teech_73

Teech_74

Teech_75

Teech_76

Teech_77

Teech_78
(HNH endonuclease)

Teech_79

Teech_80

Teech_81

Teech_82
(CobT-like cobalamin biosynthesis protein)

Teech_83

Teech_84

Teech_85

Teech_86
(ASCE ATPase)

Teech_87

Teech_88

Teech_89

Teech_90

Teech_91

Teech_92

Teech_93

Teech_94

Teech_95

Teech_96

Teech_97

Teech_98

Teech_99

Teech_100

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX234435
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# H6
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload