| Detailed Information for Phage TforTroy |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Himani Parikh |
| Year Found | 2021 |
| Location Found | San Jose, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 37.301895 N, 121.944667 W Map |
| Discovery Notes | The area was suburban. The sample was from a garden, or more specifically from my backyard. The sample was very close to other trees and plants. There isn't normally a lot of foot traffic in this area.
Discovery Quarter: S21
Instructor: Amanda Freise
Teaching Assistant: Andrew Kapinos |
| Naming Notes | Our team named this phage TforTroy after the iconic scene in High School Musical 2 when Troye gives Gabriela a "T" necklace and all the memes that were created from it |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 4, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 4720 |
| Genome length (bp) | 43652 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAACCGGCAT |
| GC Content | 68.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AZ |
| Subcluster | AZ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | Concentric circles, ~15 mm |
| Morphotype | Siphoviridae |
| Number of Genes | 69 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP208923 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
139 |
| Pitt Freezer Box Grid# |
G10 |
| Available Files |
| GenBank File for Phamerator | Download |