Gordonia phage Vitaenoii
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Detailed Information for Phage Vitaenoii
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByX Peterson and Dex Aucoin
Year Found2024
Location FoundDurham, NC United States
Finding InstitutionDurham Technical Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates36.075457 N, 79.007587 W Map
Discovery NotesSample was retrieved from soil/silt on the bank of the Eno River off of a trail near a wood and rope bridge.
Naming NotesPhage was discovered in the bank of the Eno River in Durham North Carolina. The name loosely translates to "life at the Eno" in Latin, and is a tongue in cheek assertion that viruses, are in fact living.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage2804
Genome length (bp)74721
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length1206 bp
GC Content58.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionDurham Technical Community College
Annotation StatusIn GenBank
Plaque NotesPlaques are small, >1mm and clear with stark borders. Plaques are uniform in shape and size
Number of Genes96
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Vitaenoii_1

Vitaenoii_2

Vitaenoii_3
(DNA helicase)

Vitaenoii_4

Vitaenoii_5

Vitaenoii_6

Vitaenoii_7

Vitaenoii_8
(DNA primase)

Vitaenoii_9

Vitaenoii_10
(terminase)

Vitaenoii_11
(portal protein)

Vitaenoii_12
(minor tail protein)

Vitaenoii_13

Vitaenoii_14

Vitaenoii_15
(capsid maturation protease)

Vitaenoii_16
(capsid decoration protein)

Vitaenoii_17
(major capsid protein)

Vitaenoii_18

Vitaenoii_19

Vitaenoii_20
(head-to-tail adaptor)

Vitaenoii_21

Vitaenoii_22

Vitaenoii_23

Vitaenoii_24
(major tail protein)

Vitaenoii_25
(tail assembly chaperone)

Vitaenoii_26
(tail assembly chaperone)

Vitaenoii_27
(tape measure protein)

Vitaenoii_28
(minor tail protein)

Vitaenoii_29
(minor tail protein)

Vitaenoii_30
(minor tail protein)

Vitaenoii_31
(minor tail protein)

Vitaenoii_32

Vitaenoii_33

Vitaenoii_34

Vitaenoii_35
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Vitaenoii_36
(lysin A, protease M23 domain)

Vitaenoii_37

Vitaenoii_38

Vitaenoii_39

Vitaenoii_40

Vitaenoii_41
(Cas4 family exonuclease)

Vitaenoii_42
(WhiB family transcription factor)

Vitaenoii_43

Vitaenoii_44

Vitaenoii_45
(DNA methyltransferase)

Vitaenoii_46
(lysin B)

Vitaenoii_47
(MazG-like nucleotide pyrophosphohydrolase)

Vitaenoii_48

Vitaenoii_49
(RusA-like resolvase)

Vitaenoii_50
(nucleoside deoxyribosyltransferase)

Vitaenoii_51
(DNA polymerase III sliding clamp (Beta))

Vitaenoii_52

Vitaenoii_53
(DnaQ-like (DNA polymerase III subunit))

Vitaenoii_54
(helix-turn-helix DNA binding domain)

Vitaenoii_55

Vitaenoii_56

Vitaenoii_57
(DNA helicase)

Vitaenoii_58

Vitaenoii_59

Vitaenoii_60

Vitaenoii_61
(helix-turn-helix DNA binding domain)

Vitaenoii_62

Vitaenoii_63

Vitaenoii_64

Vitaenoii_65

Vitaenoii_66

Vitaenoii_67

Vitaenoii_68

Vitaenoii_69

Vitaenoii_70

Vitaenoii_71

Vitaenoii_72

Vitaenoii_73

Vitaenoii_74

Vitaenoii_75

Vitaenoii_76

Vitaenoii_77

Vitaenoii_78

Vitaenoii_79

Vitaenoii_80
(CobT-like cobalamin biosynthesis protein)

Vitaenoii_81

Vitaenoii_82

Vitaenoii_83
(ASCE ATPase)

Vitaenoii_84

Vitaenoii_85

Vitaenoii_86

Vitaenoii_87

Vitaenoii_88

Vitaenoii_89

Vitaenoii_90

Vitaenoii_91

Vitaenoii_92

Vitaenoii_93

Vitaenoii_94

Vitaenoii_95

Vitaenoii_96

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV915899
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 197
Pitt Freezer Box Grid# D2
Available Files
GenBank File for PhameratorDownload