Mycobacterium phage Atcoo
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Detailed Information for Phage Atcoo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMitali Athavale, Taylor Cook
Year Found2017
Location FoundParker, CO United States of America
Finding InstitutionUniversity of Colorado at Boulder
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates39.6095 N, 104.8819 W Map
Discovery NotesThe phage was isolated from potting soil in a tomato plate garden. The temperature was 33 degrees Celsius at noon.
Naming NotesThe name is a combination of our last names, Cook and Athavale. It also sounds cute and like a sneeze!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 1, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage174
Genome length (bp)49075
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCTGCCGCCCCGG
GC Content67.0%
Sequencing NotesThis phage was sequenced as part of a mixed DOGEMS sample. The sequence of this genome was confirmed to belong to this phage by PCR.
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusBeing Annotated (Expected completion by 5/15/2019)
Plaque NotesThe diameter of our phages plaques was 0.3 cm. The plaques are clear with a definitive outline. The time it was incubated for was 48hrs and the temperature was 37 degrees Celsius.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 62
Pitt Freezer Box Grid# E8