Mycobacterium phage Ksquared
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Detailed Information for Phage Ksquared
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKelsey Snyder and Kali Uhrich
Year Found2016
Location FoundCrete, NE USA
Finding InstitutionDoane University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.62 N, 96.95 W Map
Naming NotesKali and Kelsey start with K so that is why we named it Ksquared.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3779
Genome length (bp)48699
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceCCTGCCGCCCGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesWell defined, clear plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Ksquared_1
(terminase small subunit)

Ksquared_2
(terminase large subunit)

Ksquared_3
(portal protein)

Ksquared_4
(capsid maturation protease)

Ksquared_5
(scaffolding protein)

Ksquared_6
(major capsid protein)

Ksquared_7

Ksquared_8
(head-to-tail adaptor)

Ksquared_9
(head-to-tail stopper)

Ksquared_10

Ksquared_11

Ksquared_12

Ksquared_13
(tail terminator)

Ksquared_14
(major tail protein)

Ksquared_16
(tail assembly chaperone)

Ksquared_15
(tail assembly chaperone)

Ksquared_17
(tape measure protein)

Ksquared_18
(minor tail protein)

Ksquared_19
(minor tail protein)

Ksquared_20
(minor tail protein)

Ksquared_21
(minor tail protein)

Ksquared_22
(minor tail protein)

Ksquared_23

Ksquared_24

Ksquared_25

Ksquared_26
(lysin A)

Ksquared_27
(lysin B)

Ksquared_28
(holin)

Ksquared_29

Ksquared_30
(integrase)

Ksquared_31
(immunity repressor)

Ksquared_32
(excise)

Ksquared_33

Ksquared_34
(antirepressor)

Ksquared_35

Ksquared_36

Ksquared_37

Ksquared_38

Ksquared_39

Ksquared_40

Ksquared_41

Ksquared_42

Ksquared_43

Ksquared_44

Ksquared_45
(exonuclease)

Ksquared_46
(ssDNA binding protein)

Ksquared_47

Ksquared_48

Ksquared_49
(DNA translocase)

Ksquared_50
(resolvase)

Ksquared_51

Ksquared_52

Ksquared_53

Ksquared_54

Ksquared_55

Ksquared_56
(DNA methylase)

Ksquared_57

Ksquared_58
(DNA methylase)

Ksquared_59
(DNA methylase)

Ksquared_60
(HTH DNA binding protein)

Ksquared_61

Ksquared_62

Ksquared_63
(HNH endonuclease)

Ksquared_64

Ksquared_65

Ksquared_66
(HTH DNA binding protein)

Ksquared_67

Ksquared_68

Ksquared_69
(peptidase)

Ksquared_70

Ksquared_71

Ksquared_72

Ksquared_73

Ksquared_74

Ksquared_75
(HTH DNA binding domain protein)

Ksquared_76

Ksquared_77

Ksquared_78

Ksquared_79

Ksquared_80
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF281061
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 46
Pitt Freezer Box Grid# A5
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload