Mycobacterium phage Langerak
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Detailed Information for Phage Langerak
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDale Schipper
Year Found2008
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates42.8109 N, 85.9503 W Map
Discovery NotesFrom manure compost pile behind 6814 Byron Road in Zeeland, about 100 feet from the SE corner of the house. 50°F
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 8, 2019
Sequencing FacilityHope College
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1590
Genome length (bp)47087
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceCCCGCCCCCCGA
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionProvidence College
Annotation StatusIn GenBank
Plaque Notes1-2 millimeters in diameter; clear center and turbid outer ring; incubated 24 hours at 37°C
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Langerak_1
(terminase small subunit)

Langerak_2
(terminase large subunit)

Langerak_3
(portal protein)

Langerak_4
(capsid maturation protease)

Langerak_5
(scaffolding protein)

Langerak_6
(major capsid protein)

Langerak_7

Langerak_8
(head-to-tail adaptor)

Langerak_9
(head-to-tail stopper)

Langerak_10

Langerak_11

Langerak_12

Langerak_13
(tail terminator)

Langerak_14
(major tail protein)

Langerak_15
(tail assembly chaperone)

Langerak_16
(tail assembly chaperone)

Langerak_17
(tape measure protein)

Langerak_18
(minor tail protein)

Langerak_19
(minor tail protein)

Langerak_20
(minor tail protein)

Langerak_21
(minor tail protein)

Langerak_22
(minor tail protein)

Langerak_23

Langerak_24

Langerak_25

Langerak_26
(lysin A)

Langerak_27
(lysin B)

Langerak_28
(holin)

Langerak_29

Langerak_30
(tyrosine integrase)

Langerak_31
(immunity repressor)

Langerak_32
(excise)

Langerak_33

Langerak_34
(antirepressor)

Langerak_35

Langerak_36

Langerak_37

Langerak_38

Langerak_39

Langerak_40

Langerak_41

Langerak_42

Langerak_43

Langerak_44

Langerak_45

Langerak_46
(Cas4 family exonuclease)

Langerak_47
(RecT-like DNA pairing protein)

Langerak_48

Langerak_49
(FtsK-like DNA translocase)

Langerak_50
(RusA-like resolvase)

Langerak_51

Langerak_52

Langerak_53

Langerak_54

Langerak_55

Langerak_56
(helix-turn-helix DNA binding domain protein)

Langerak_57

Langerak_58
(DNA methyltransferase)

Langerak_59

Langerak_60

Langerak_61
(DNA methyltransferase)

Langerak_62
(RepA-like replication initiator)

Langerak_63

Langerak_64

Langerak_65
(helix-turn-helix DNA binding domain protein)

Langerak_66

Langerak_67

Langerak_68

Langerak_69

Langerak_70

Langerak_71

Langerak_72

Langerak_73
(ribbon-helix-helix DNA binding domain protein)

Langerak_74

Langerak_75

Langerak_76

Langerak_77
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP172867
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2008HOPElangerakDJS
SEA Lysate Titer 4.5e10
Pitt Freezer Box# 3
Pitt Freezer Box Grid# 64
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload