Mycobacterium phage Thespis
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Detailed Information for Phage Thespis
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDavid Bushhouse
Year Found2016
Location FoundHampden-Sydney, VA USA
Finding InstitutionHampden-Sydney College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature29°C
GPS Coordinates37.2411 N, 78.4641 W Map
Discovery NotesFound in moist loam at the base of an American Beech in central Virginia.
Naming NotesThespis was the first true actor, so this name gives a nod to both acting and the International Thespian Society.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 26, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1298
Genome length (bp)47618
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCTGCCGCCCCGA
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes78
Has been Phamerated?Yes
Gene List

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Thespis_1
(terminase small subunit)

Thespis_2
(terminase large subunit)

Thespis_3
(portal protein)

Thespis_4
(capsid maturation protease)

Thespis_5
(scaffolding protein)

Thespis_6
(major capsid protein)

Thespis_7

Thespis_8
(head-to-tail adaptor)

Thespis_9
(head-to-tail stopper)

Thespis_10

Thespis_11

Thespis_12

Thespis_13
(tail terminator)

Thespis_14
(major tail subunit)

Thespis_15
(tail assembly chaperone)

Thespis_16
(tail assembly chaperone)

Thespis_17
(tapemeasure protein)

Thespis_18
(minor tail protein)

Thespis_19
(minor tail protein)

Thespis_20
(minor tail protein)

Thespis_21
(minor tail protein)

Thespis_22
(minor tail protein)

Thespis_23

Thespis_24

Thespis_25

Thespis_26
(lysin A)

Thespis_27
(lysin B)

Thespis_28

Thespis_29

Thespis_30
(integrase)

Thespis_31
(immunity repressor)

Thespis_32
(excise)

Thespis_33

Thespis_34
(antirepressor)

Thespis_35

Thespis_36

Thespis_37

Thespis_38

Thespis_39

Thespis_40

Thespis_41

Thespis_42

Thespis_43

Thespis_44

Thespis_45
(exonuclease)

Thespis_46
(ssDNA binding protein)

Thespis_47

Thespis_48

Thespis_49
(DNA translocase)

Thespis_50
(RusA-like DNA endonuclease)

Thespis_51

Thespis_52

Thespis_53

Thespis_54

Thespis_55
(DNA methylase)

Thespis_56

Thespis_57
(DNA methylase)

Thespis_58
(DNA methylase)

Thespis_59
(HTH DNA binding protein)

Thespis_60

Thespis_61

Thespis_62
(DNA methylase)

Thespis_63

Thespis_64
(HTH DNA binding protein)

Thespis_65

Thespis_66

Thespis_67
(HTH DNA binding protein)

Thespis_68

Thespis_69

Thespis_70

Thespis_71

Thespis_72

Thespis_73
(ribbon-helix-helix DNA binding protein)

Thespis_74

Thespis_75

Thespis_76

Thespis_77

Thespis_78
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG198785
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 45
Pitt Freezer Box Grid# A11
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload