Mycobacterium phage Glaske
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Detailed Information for Phage Glaske
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAshley Burdine
Year Found2017
Location FoundLongview, TX USA
Finding InstitutionLeTourneau University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature27°C
GPS Coordinates32.46555 N, 94.72777 W Map
Discovery NotesMy sample was taken by a tree in Longview, Texas from LeTourneau University on August 29, 2017 around 8:15 a.m.
The soil was still a little damp from it being the morning. The tree had many protruding roots coming out of the ground covering the nearby soil. I dug in between these roots, right next to the tree. The soil was in the middle of patches of moss, but the soil I collected contained no moss. The soil was also pretty sandy in nature, but was a little thicker as I dug. It was also rocky, with little rocks covering the soil that I collected. I only dug down an inch or two at most when collecting my soil. My sample came from the upper surfaces of the ground. As I mentioned before, the soil sample I collected was a little thicker and damper, than the surface soil which was more sandy and rocky.
Naming NotesI named this phage from the street name that I found it on. The tree that I collected my soil near, is located at the corner by our science lab building. The building that our science lab is located in is named Glaske. The street name that this tree is on is also named Glaske. Therefore, using these two criteria, I named by phage Glaske.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1965
Genome length (bp)48222
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCTGCCGCCCCGA
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionLeTourneau University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Glaske_1
(terminase small subunit)

Glaske_2
(terminase large subunit)

Glaske_3
(portal protein)

Glaske_4
(capsid maturation protease)

Glaske_5
(scaffolding protein)

Glaske_6
(major capsid protein)

Glaske_7

Glaske_8
(head-to-tail adaptor)

Glaske_9
(head-to-tail stopper)

Glaske_10

Glaske_11

Glaske_12

Glaske_13
(tail terminator)

Glaske_14
(major tail protein)

Glaske_15
(tail assembly chaperone)

Glaske_16
(tail assembly chaperone)

Glaske_17
(tape measure protein)

Glaske_18
(minor tail protein)

Glaske_19
(minor tail protein)

Glaske_20
(minor tail protein)

Glaske_21
(minor tail protein)

Glaske_22
(minor tail protein)

Glaske_23

Glaske_24

Glaske_25

Glaske_26
(lysin A)

Glaske_27
(lysin B)

Glaske_28

Glaske_29

Glaske_30
(tyrosine integrase)

Glaske_31
(immunity repressor)

Glaske_32
(excise)

Glaske_33

Glaske_34
(antirepressor)

Glaske_35

Glaske_36

Glaske_37

Glaske_38

Glaske_39

Glaske_40

Glaske_41

Glaske_42

Glaske_43

Glaske_44

Glaske_45
(RecE-like exonuclease)

Glaske_46
(RecT-like ssDNA binding protein)

Glaske_47

Glaske_48

Glaske_49
(FtsK-like DNA translocase)

Glaske_50
(RusA-like resolvase)

Glaske_51

Glaske_52

Glaske_53
(DNA methylase)

Glaske_54
(DNA methylase)

Glaske_55

Glaske_56
(helix-turn-helix DNA binding domain protein)

Glaske_57

Glaske_58

Glaske_59
(HNH endonuclease)

Glaske_60

Glaske_61

Glaske_62
(helix-turn-helix DNA binding domain protein)

Glaske_63
(DnaC-like helicase loader)

Glaske_64

Glaske_65
(MerR-like helix-turn-helix DNA binding domain protein)

Glaske_66

Glaske_67

Glaske_68

Glaske_69

Glaske_70

Glaske_71

Glaske_72

Glaske_73

Glaske_74
(ribbon-helix-helix DNA binding domain protein)

Glaske_75

Glaske_76

Glaske_77

Glaske_78
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN807250
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 59
Pitt Freezer Box Grid# B4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload