Mycobacterium phage Megiddo
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Megiddo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKatelyn Gutierrez and Marcus Hester
Year Found2018
Location FoundLongview, TX USA
Finding InstitutionLeTourneau University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates32.4624 N, 94.7262 W Map
Discovery NotesA solid soil sample was collected from the base of a flowered bush in the wooded area by south field. Soil was dark and moist with tiny roots and wood pieces. On a warm morning the top 3-inch layer of soil and other natural matter was dug through with a plastic spoon and the underlying layer of soil was scooped into the plastic bag and sealed.
Ambient Temperature: 27 degrees Celsius
Time: 10:41 AM October 4, 2018
Naming NotesMegiddo is the Hebrew word for Armageddon, the site of the final end of times battle as written in the book of Revelation. Phage therapy reminds me of the idea of destruction as a means of restoration and redemption.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage339
Genome length (bp)48783
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCTGCCGCCCCGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionLeTourneau University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Megiddo_1
(terminase small subunit)

Megiddo_2
(terminase large subunit)

Megiddo_3
(portal protein)

Megiddo_4
(capsid maturation protease)

Megiddo_5
(scaffolding protein)

Megiddo_6
(major capsid protein)

Megiddo_7

Megiddo_8
(head-to-tail adaptor)

Megiddo_9
(head-to-tail stopper)

Megiddo_10

Megiddo_11

Megiddo_12

Megiddo_13
(tail terminator)

Megiddo_14
(major tail protein)

Megiddo_15
(tail assembly chaperone)

Megiddo_16
(tail assembly chaperone)

Megiddo_17
(tape measure protein)

Megiddo_18
(minor tail protein)

Megiddo_19
(minor tail protein)

Megiddo_20
(minor tail protein)

Megiddo_21
(minor tail protein)

Megiddo_22
(minor tail protein)

Megiddo_23

Megiddo_24

Megiddo_25

Megiddo_26
(lysin A)

Megiddo_27
(lysin B)

Megiddo_28

Megiddo_29

Megiddo_30
(tyrosine integrase)

Megiddo_31
(immunity repressor)

Megiddo_32
(excise)

Megiddo_33

Megiddo_34
(antirepressor)

Megiddo_35

Megiddo_36

Megiddo_37

Megiddo_38

Megiddo_39

Megiddo_40

Megiddo_41

Megiddo_42

Megiddo_43

Megiddo_44

Megiddo_45
(RecE-like exonuclease)

Megiddo_46
(RecT-like ssDNA binding protein)

Megiddo_47

Megiddo_48

Megiddo_49
(FtsK-like DNA translocase)

Megiddo_50
(RusA-like resolvase)

Megiddo_51

Megiddo_52

Megiddo_53
(DNA methylase)

Megiddo_54

Megiddo_55
(DNA methylase)

Megiddo_56

Megiddo_57
(helix-turn-helix DNA binding domain protein)

Megiddo_58

Megiddo_59
(DNA methylase)

Megiddo_60

Megiddo_61
(HNH endonuclease)

Megiddo_62
(helix-turn-helix DNA binding domain protein)

Megiddo_63
(DnaC-like helicase loader)

Megiddo_64

Megiddo_65
(helix-turn-helix DNA binding protein)

Megiddo_66

Megiddo_67

Megiddo_68

Megiddo_69

Megiddo_70

Megiddo_71

Megiddo_72

Megiddo_73

Megiddo_74
(ribbon-helix-helix DNA binding domain protein)

Megiddo_75

Megiddo_76

Megiddo_77

Megiddo_78
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN807249
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 85
Pitt Freezer Box Grid# C10
Available Files
EM PictureDownload
GenBank File for PhameratorDownload