Detailed Information for Phage Demosthenes |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Patrick Rimple |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.436419 N, 79.949316 W Map |
Discovery Notes | This phage was found on the middle of a path down in panther hollow that crosses between the railroad tracks and the pond. It had rained the day before and was around 80 degrees F that day. The soil was the wet top layer that people had stepped on. |
Naming Notes | Demosthenes is the name a character in the Ender's Game series adopts so that she may write deep philosophical papers. I really liked that so I wanted to name one of my phages after her, and in so I also honor the ancient Greek statesman of the same name who tried to keep Athens free form Macedonia. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 3, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1146 |
Genome length (bp) | 74073 |
Character of genome ends | Direct Terminal Repeat |
End Determination Notes | Buildup of reads flanking region of increased coverage. |
GC Content | 59.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CS |
Subcluster | CS4 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are clear and pinprick size to 1mm in size. |
Number of Genes | 95 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU998242 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
4 |
Pitt Freezer Box Grid# |
G6 |
Available Files |
Final DNAMaster File | Download |