Detailed Information for Phage Ejemplo |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Lee Hughes |
Year Found | 2020 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.179738 N, 97.052192 W Map |
Discovery Notes | Collected soil from southeastern Denton, Texas. The temperature was about 85 degrees F and it was extremely humid from rain earlier in the morning. The location is on the edge of a lawn near some willow trees. |
Naming Notes | I isolated this phage to use as an example of how to isolate phages while videoing each step. I chose "Ejemplo" because it means "example" in Spanish. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 28, 2022 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 151 |
Genome length (bp) | 51517 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGCCAGTGAT |
GC Content | 65.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | Mostly clear plaques. Most are about 1mm in diameter, but there are often smaller plaques mixed in on the titer plates (these small plaques give both sizes of plaques when used to infect a culture). |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON526985 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
117 |
Pitt Freezer Box Grid# |
F10 |
Available Files |
GenBank File for Phamerator | Download |