Gordonia phage Elinal
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Detailed Information for Phage Elinal
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByElina Luong
Year Found2021
Location FoundSanta Cruz, CA Santa Cruz
Finding InstitutionUniversity of California, Santa Cruz
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.414 N, 119.8489 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1355
Genome length (bp)48336
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content60.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of California, Santa Cruz
Annotation StatusIn GenBank
Number of Genes76
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Elinal_1
(terminase small subunit)

Elinal_2

Elinal_3

Elinal_4

Elinal_5
(terminase large subunit)

Elinal_6
(portal protein)

Elinal_7
(capsid maturation protease)

Elinal_8
(scaffolding protein)

Elinal_9
(major capsid protein)

Elinal_10
(head-to-tail adapter)

Elinal_11
(head-to-tail stopper)

Elinal_12

Elinal_13
(tail terminator)

Elinal_14
(major tail protein)

Elinal_15
(tail assembly chaperone)

Elinal_16
(tail assembly chaperone)

Elinal_17
(tape measure protein)

Elinal_18
(minor tail protein)

Elinal_19
(minor tail protein)

Elinal_20
(minor tail protein)

Elinal_21
(lysin A, L-Ala-D-Glu peptidase domain)

Elinal_22
(lysin A, glycosyl hydrolase domain)

Elinal_23
(holin)

Elinal_24

Elinal_25

Elinal_26

Elinal_27

Elinal_28

Elinal_29

Elinal_30
(minor tail protein)

Elinal_31

Elinal_32

Elinal_33

Elinal_34

Elinal_35

Elinal_36

Elinal_37

Elinal_38
(SprT-like protease)

Elinal_39

Elinal_40
(MerR-like helix-turn-helix DNA binding domain protein)

Elinal_41

Elinal_42
(VRR-Nuc domain protein)

Elinal_43

Elinal_44

Elinal_45
(ASCE ATPase)

Elinal_46
(RecB-like exonuclease/helicase)

Elinal_47

Elinal_48
(DNA polymerase I)

Elinal_49
(deoxycytidylate deaminase)

Elinal_50
(lysin B)

Elinal_51

Elinal_52
(thymidylate synthase)

Elinal_53

Elinal_54

Elinal_55

Elinal_56

Elinal_57

Elinal_58
(dUTPase)

Elinal_59
(thymidylate kinase)

Elinal_60
(helicase)

Elinal_61

Elinal_62

Elinal_63

Elinal_64

Elinal_65

Elinal_66
(DNA primase/helicase)

Elinal_67

Elinal_68

Elinal_69

Elinal_70

Elinal_71

Elinal_72

Elinal_73

Elinal_74

Elinal_75

Elinal_76
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR553897
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload