| Detailed Information for Phage Gorko |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Ali Schultz |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.444800 N, 79.952700 W Map |
| Discovery Notes | The temperature was 30 degrees Fahrenheit at the time of collection and it was snowing.
The weather conditions in the past 24 hours were around 45 degrees Fahrenheit and slight rain. Soil conditions: soil was moist with lots of pebbles and dead leaves. |
| Naming Notes | Long story short, I was talking about baby names with a friend over text. I made a longish list of normal, everyday names, and I slid in Gorko in the middle of it to see if my friend would say anything. Little did they know, Gorko is my baby (phage of course). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 26, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1064 |
| Genome length (bp) | 75158 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 191 bp |
| GC Content | 59.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Clear |
| Morphotype | Siphoviridae |
| Number of Genes | 103 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK801728 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
3.3 x 10^10 |
| Pitt Freezer Box# |
3 |
| Pitt Freezer Box Grid# |
D8 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
