Detailed Information for Phage Gumpizza |
Discovery Information |
Isolation Host | Curtobacterium flaccumfaciens NRRL B-59340 |
Found By | Yusuf Hameed and and Zac Claude |
Year Found | 2024 |
Location Found | Orono, ME United States of America |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 44.93055 N, 68.69333 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 7, 2025 |
Sequencing Facility | Hubbard Center for Genome Studies at the University of New Hampshire |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NovaSeq X Plus |
Read Type | Single-end reads |
Read Length | 250 bp |
Approximate Shotgun Coverage | 121 |
Genome length (bp) | 39922 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAACGGCAT |
GC Content | 70.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Maine, Honors College |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | varied plaque morphology, roughy 3mm in diameter with more turbid outer. |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |