Curtobacterium phage Gumpizza
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Detailed Information for Phage Gumpizza
Discovery Information
Isolation HostCurtobacterium flaccumfaciens NRRL B-59340
Found ByYusuf Hameed and and Zac Claude
Year Found2024
Location FoundOld Town, ME United States of America
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates44.93055 N, 68.69333 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 7, 2025
Sequencing FacilityHubbard Center for Genome Studies at the University of New Hampshire
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NovaSeq X Plus
Read TypeSingle-end reads
Read Length250 bp
Approximate Shotgun Coverage121
Genome length (bp)39922
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAACGGCAT
GC Content70.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
SubclusterAZ5
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusQC Complete
Plaque Notesvaried plaque morphology, roughy 3mm in diameter with more turbid outer.
MorphotypeSiphoviridae
Number of Genes61
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Gumpizza_1
(terminase, small subunit)

Gumpizza_2
(terminase, large subunit)

Gumpizza_3
(portal protein)

Gumpizza_4
(capsid maturation protease)

Gumpizza_5
(endolysin)

Gumpizza_6
(scaffolding protein)

Gumpizza_7
(major capsid protein)

Gumpizza_8
(head-to-tail adaptor)

Gumpizza_9

Gumpizza_10
(head-to-tail stopper)

Gumpizza_11

Gumpizza_12
(tail terminator)

Gumpizza_13
(major tail protein)

Gumpizza_14
(tail assembly chaperone)

Gumpizza_15
(tail assembly chaperone)

Gumpizza_16
(tape measure protein)

Gumpizza_17
(minor tail protein)

Gumpizza_18
(minor tail protein)

Gumpizza_19
(minor tail protein)

Gumpizza_20
(minor tail protein)

Gumpizza_21

Gumpizza_22

Gumpizza_23

Gumpizza_24
(deoxynucleoside monophosphate kinase)

Gumpizza_25

Gumpizza_26
(Cas4 family exonuclease)

Gumpizza_27
(LAGLIDADG endonuclease)

Gumpizza_28

Gumpizza_29
(recombination directionality factor)

Gumpizza_30

Gumpizza_31
(NrdH-like glutaredoxin)

Gumpizza_32

Gumpizza_33

Gumpizza_34

Gumpizza_35
(Holliday junction resolvase)

Gumpizza_36
(DNA primase/helicase)

Gumpizza_37
(DNA polymerase I)

Gumpizza_38

Gumpizza_39

Gumpizza_40
(helix-turn-helix DNA binding domain)

Gumpizza_41

Gumpizza_42
(serine integrase)

Gumpizza_43

Gumpizza_44
(RNA binding protein)

Gumpizza_45

Gumpizza_46

Gumpizza_47

Gumpizza_48

Gumpizza_49

Gumpizza_50

Gumpizza_51

Gumpizza_52
(DNA methyltransferase)

Gumpizza_53

Gumpizza_54

Gumpizza_55

Gumpizza_56

Gumpizza_57

Gumpizza_58

Gumpizza_59

Gumpizza_60 — tRNA
(tRNA-Asn(gtt))

Gumpizza_61

Gumpizza_62
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 199
Pitt Freezer Box Grid# C6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload