Streptomyces phage Itza
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Detailed Information for Phage Itza
Discovery Information
Isolation HostStreptomyces griseofuscus ATCC 23916
Found ByHarsha Kaul and Ryan Young
Year Found2018
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates38.63976 N, 90.2945 W Map
Discovery NotesSoil sample was dry and sandy. Soil depth was 2.5 cm. Temperature outside was 27.22 degrees Celcius at that time. The location was inside Forest Park beside a bench and a sidewalk.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 18, 2019
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage247
Genome length (bp)50426
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGCTGCGTCAT
GC Content68.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD6
Cluster Life CycleTemperate
Other Cluster Members

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Aaronocolus (BD1)

Asten (BD1)

BarryBee (BD1)

BeardedLady (BD1)

Bovely (BD1)

Brataylor (BD1)

BryanRecycles (BD1)

Caliburn (BD1)

Celeste (BD1)

Chucky (BD1)

Danzina (BD1)

Dattran (BD1)

Dwayne (BD1)

Eddasa (BD1)

Ejemplo (BD1)

Emaanora (BD1)

EnochSoames (BD1)

Esperer (BD1)

Goby (BD1)

Godpower (BD1)

Hippo (BD1)

Hydra (BD1)

Indigo (BD1)

Izzy (BD1)

Jash (BD1)

Katalie (BD1)

Lannister (BD1)

Legacy (BD1)

Leviticus (BD1)

Lika (BD1)

Lorelei (BD1)

Maneekul (BD1)

Nabi (BD1)

Nanodon (BD1)

Nerdos (BD1)

Oliynyk (BD1)

Ozzie (BD1)

OzzyJ (BD1)

Phettuccine (BD1)

Rana (BD1)

RedBear (BD1)

Rusticus (BD1)

SarahRose (BD1)

Snorlax (BD1)

South40 (BD1)

Sujidade (BD1)

SunsetPointe (BD1)

TagePhighter (BD1)

Toma (BD1)

Triste (BD1)

TuanPN (BD1)

Unstoppable (BD1)

Werner (BD1)

Whatever (BD1)

Yasdnil (BD1)

Zemlya (BD1)

Alvy (BD2)

Amethyst (BD2)

Andris (BD2)

Animus (BD2)

BartholomewSD (BD2)

Bowden (BD2)

Caelum (BD2)

Daudau (BD2)

Diane (BD2)

ELB20 (BD2)

GirlDinner (BD2)

Haizum (BD2)

Hank144 (BD2)

Issmi (BD2)

Janus (BD2)

Jevington (BD2)

Loofah (BD2)

Marav (BD2)

Nishikigoi (BD2)

Omar (BD2)

Pablito (BD2)

Paedore (BD2)

Paolo (BD2)

Puginator (BD2)

R4 (BD2)

SqueakyClean (BD2)

Superstar (BD2)

Tefunt (BD2)

Thestral (BD2)

TinaBelcher (BD2)

Triumph (BD2)

TrvxScott (BD2)

Zainub (BD2)

Alsaber (BD3)

Amela (BD3)

Celery (BD3)

Conan (BD3)

Dexers (BD3)

ElGato (BD3)

Kaine (BD3)

Pavo (BD3)

phiCAM (BD3)

Provolone (BD3)

Saftant (BD3)

Speedwell (BD3)

Vanseggelen (BD3)

Verabelle (BD3)

Verse (BD3)

Yosif (BD3)

BroPlease (BD4)

GreenWeasel (BD4)

phiHau3 (BD4)

StrepC (BD5)

Celia (BD6)

Itza (BD6)

Urza (BD6)

VieEnRose (BD6)

Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque NotesMedium sized plaques of cloudy (bullseye) morphology. This indicates that there is a dark, cloudy ring around the central plaque in the lawn.
Number of Genes80
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Itza_1

Itza_2
(HNH endonuclease)

Itza_3 — tRNA
(tRNA-Trp(cca))

Itza_4
(phosphoesterase)

Itza_5
(terminase small subunit)

Itza_6
(terminase large subunit)

Itza_7
(portal protein)

Itza_8

Itza_9
(scaffolding protein)

Itza_10
(major capsid protein)

Itza_11
(head-to-tail adaptor)

Itza_12
(head-to-tail stopper)

Itza_13

Itza_14
(tail terminator)

Itza_15
(major tail protein)

Itza_16
(tail assembly chaperone)

Itza_17
(tail assembly chaperone)

Itza_18
(tape measure protein)

Itza_19
(minor tail protein)

Itza_20
(minor tail protein)

Itza_21

Itza_22

Itza_23
(minor tail protein)

Itza_24
(minor tail protein)

Itza_25

Itza_26
(tail fiber protein)

Itza_27

Itza_28
(endolysin)

Itza_29

Itza_30
(DNA binding protein)

Itza_31
(immunity repressor)

Itza_32

Itza_33
(exonuclease)

Itza_34

Itza_35

Itza_36

Itza_37
(DnaB-like dsDNA helicase)

Itza_38
(holliday junction resolvase)

Itza_39

Itza_40
(DNA primase)

Itza_41
(DNA primase)

Itza_42

Itza_43

Itza_44
(helix-turn-helix DNA-binding domain protein)

Itza_45
(metallophosphoesterase)

Itza_46

Itza_47
(DNA binding protein)

Itza_48
(Lsr2-like DNA bridging protein)

Itza_49

Itza_50
(serine integrase)

Itza_51

Itza_52

Itza_53

Itza_54
(DnaE-like DNA polymerase III alpha)

Itza_55

Itza_56

Itza_57

Itza_58

Itza_59

Itza_60

Itza_61

Itza_62
(deoxynucleoside monophosphate kinase)

Itza_63

Itza_64

Itza_65

Itza_66

Itza_67

Itza_68

Itza_69

Itza_70

Itza_71

Itza_72

Itza_73

Itza_74

Itza_75

Itza_76
(OCR-like antirestriction protein)

Itza_77

Itza_78

Itza_79

Itza_80

Itza_81
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT310862
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload