| Discovery Information |
| Isolation Host | Arthrobacter sulfureus ATCC 19098 |
| Duplicates of this Phage | GoldPhreddi, LittleEeyore, ReddiWip, Tortugita |
| Found By | Nnaemeka Unanwa |
| Year Found | 2023 |
| Location Found | Los Angeles, CA US |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.067244 N, 118.448416 W Map |
| Discovery Notes | Soil sample mixed culture of A. globiformis, A atrocyaneous, A. sulfureus, A. sp. Incubated at 30 °C for 48 hrs.
Team #1: Phaging JBRD
Rodrigo Berber-Pulido
Isabelle Bursulaya
Daniela Martinez
Joey Okumura
Team #2: Bloothirsty Chinchillas
Angelynn Nguyen
Savannah Scriven
Nnaemeka Unanwa
Riley Rosenbluh
AL Quarter and Lab section: W23-1A
Instructor: Amanda Freise
Teaching Assistant: Dominic Garza
Undergraduate Assistant(s): Fadi and Kia |
| Naming Notes | Named after Iroh’s tea shop “The Jasmine Dragon” from Avatar: The Last Airbender |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 18, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 748 |
| Genome length (bp) | 43672 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAACTGGCAT |
| GC Content | 66.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AZ |
| Subcluster | AZ4 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | small, clear, round, 1-1.5mm diameter |
| Number of Genes | 69 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978861 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
184 |
| Pitt Freezer Box Grid# |
E2 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
