Streptomyces phage Nerdos
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Detailed Information for Phage Nerdos
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByAden Kassa
Year Found2017
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates33.2017 N, 97.16127 W Map
Discovery NotesIt was gathered on March 15, 2017 at 5:00pm.
It had previously rained and the soil was very moist and was accompanied by a thick strong scent.
The soil itself was a dark brown color.
Naming NotesI named it after my brother's childhood name.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 9, 2017
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)49557
Character of genome endsUnknown
Overhang Length11 bases
Overhang SequenceCGGGCAGTGAT
GC Content66.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Cluster Life CycleTemperate
Other Cluster Members

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Aaronocolus (BD1)

Asten (BD1)

BarryBee (BD1)

BeardedLady (BD1)

Bovely (BD1)

Brataylor (BD1)

BryanRecycles (BD1)

Caliburn (BD1)

Celeste (BD1)

Chucky (BD1)

Danzina (BD1)

Dattran (BD1)

Dwayne (BD1)

Eddasa (BD1)

Ejemplo (BD1)

Emaanora (BD1)

EnochSoames (BD1)

Esperer (BD1)

Goby (BD1)

Godpower (BD1)

Hippo (BD1)

Hydra (BD1)

Indigo (BD1)

Izzy (BD1)

Jash (BD1)

Katalie (BD1)

Lannister (BD1)

Legacy (BD1)

Leviticus (BD1)

Lika (BD1)

Lorelei (BD1)

Maneekul (BD1)

Nabi (BD1)

Nanodon (BD1)

Nerdos (BD1)

Oliynyk (BD1)

Ozzie (BD1)

OzzyJ (BD1)

Phettuccine (BD1)

Rana (BD1)

RedBear (BD1)

Rusticus (BD1)

SarahRose (BD1)

Snorlax (BD1)

South40 (BD1)

Sujidade (BD1)

SunsetPointe (BD1)

TagePhighter (BD1)

Toma (BD1)

Triste (BD1)

TuanPN (BD1)

Unstoppable (BD1)

Werner (BD1)

Whatever (BD1)

Yasdnil (BD1)

Zemlya (BD1)

Alvy (BD2)

Amethyst (BD2)

Andris (BD2)

Animus (BD2)

BartholomewSD (BD2)

Bowden (BD2)

Caelum (BD2)

Daudau (BD2)

Diane (BD2)

ELB20 (BD2)

GirlDinner (BD2)

Haizum (BD2)

Hank144 (BD2)

Issmi (BD2)

Janus (BD2)

Jevington (BD2)

Loofah (BD2)

Marav (BD2)

Nishikigoi (BD2)

Omar (BD2)

Pablito (BD2)

Paedore (BD2)

Paolo (BD2)

Puginator (BD2)

R4 (BD2)

SqueakyClean (BD2)

Superstar (BD2)

Tefunt (BD2)

Thestral (BD2)

TinaBelcher (BD2)

Triumph (BD2)

TrvxScott (BD2)

Zainub (BD2)

Alsaber (BD3)

Amela (BD3)

Celery (BD3)

Conan (BD3)

Dexers (BD3)

ElGato (BD3)

Kaine (BD3)

Pavo (BD3)

phiCAM (BD3)

Provolone (BD3)

Saftant (BD3)

Speedwell (BD3)

Vanseggelen (BD3)

Verabelle (BD3)

Verse (BD3)

Yosif (BD3)

BroPlease (BD4)

GreenWeasel (BD4)

phiHau3 (BD4)

StrepC (BD5)

Celia (BD6)

Itza (BD6)

Urza (BD6)

VieEnRose (BD6)

Annotating InstitutionUniversity of North Texas
Annotation StatusIn GenBank
Plaque NotesThe plaques looked both big and small. The plaque was pretty clear and definite.
Number of Genes72
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Nerdos_1

Nerdos_2
(HNH endonuclease)

Nerdos_3

Nerdos_4
(thioredoxin)

Nerdos_5
(terminase small subunit)

Nerdos_6
(terminase large subunit)

Nerdos_7
(portal protein)

Nerdos_8

Nerdos_9
(scaffolding protein)

Nerdos_10
(major capsid protein)

Nerdos_11
(head-to-tail adaptor)

Nerdos_12
(head-to-tail stopper)

Nerdos_13

Nerdos_14
(tail terminator)

Nerdos_15

Nerdos_16
(tail assembly chaperone)

Nerdos_17
(tail assembly chaperone)

Nerdos_18
(tape measure protein)

Nerdos_19
(minor tail protein)

Nerdos_20
(minor tail protein)

Nerdos_21

Nerdos_22

Nerdos_23

Nerdos_24

Nerdos_25

Nerdos_26
(endolysin)

Nerdos_27

Nerdos_28
(DNA binding protein)

Nerdos_29
(immunity repressor)

Nerdos_30

Nerdos_31
(exonuclease)

Nerdos_32

Nerdos_33

Nerdos_34
(DnaB-like dsDNA helicase)

Nerdos_35
(holliday junction resolvase)

Nerdos_36

Nerdos_37
(DNA primase)

Nerdos_38
(DNA primase)

Nerdos_39

Nerdos_40

Nerdos_41

Nerdos_42
(MRE11 double-strand break endo/exonuclease)

Nerdos_43

Nerdos_44
(DNA binding protein)

Nerdos_45

Nerdos_46
(ribonucleotide reductase)

Nerdos_47
(Lsr2-like briding protein)

Nerdos_48
(serine integrase)

Nerdos_49
(ThyX-like thymidylate synthase)

Nerdos_50

Nerdos_51

Nerdos_52
(DnaE-like DNA polymerase III subunit alpha)

Nerdos_53

Nerdos_54

Nerdos_55

Nerdos_56
(deoxynucleoside monophosphate kinase)

Nerdos_57

Nerdos_58

Nerdos_59

Nerdos_60

Nerdos_61

Nerdos_62

Nerdos_63
(HNH endonuclease)

Nerdos_64

Nerdos_65
(OCR-like antirestriction protein)

Nerdos_66

Nerdos_67

Nerdos_68

Nerdos_69

Nerdos_70

Nerdos_71

Nerdos_72
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK433278
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 70
Pitt Freezer Box Grid# C12
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload