Mycobacterium phage Phegasus
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Detailed Information for Phage Phegasus
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByElizabeth Song
Year Found2019
Location FoundCT
Finding InstitutionBrown University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.3029 N, 72.6537 W Map
Discovery NotesSoil sample collected by Dr. Bungiro from manure area in a horse barn
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage921
Genome length (bp)47578
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceCCCGCCCCCCGA
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionArizona State University
Annotation StatusIn GenBank
Plaque Notessmall, clear plaques
MorphotypeSiphoviridae
Number of Genes81
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Phegasus_1
(terminase small subunit)

Phegasus_2
(terminase large subunit)

Phegasus_3
(portal protein)

Phegasus_4
(capsid maturation protease)

Phegasus_5
(scaffolding protein)

Phegasus_6
(major capsid protein)

Phegasus_7

Phegasus_8
(head-to-tail adaptor)

Phegasus_9
(head-to-tail stopper)

Phegasus_10

Phegasus_11

Phegasus_12

Phegasus_13
(tail terminator)

Phegasus_14
(major tail protein)

Phegasus_15
(tail assembly chaperone)

Phegasus_16
(tail assembly chaperone)

Phegasus_17
(tape measure protein)

Phegasus_18
(minor tail protein)

Phegasus_19
(minor tail protein)

Phegasus_20
(minor tail protein)

Phegasus_21
(minor tail protein)

Phegasus_22

Phegasus_23

Phegasus_24

Phegasus_25

Phegasus_26
(lysin A)

Phegasus_27
(lysin B)

Phegasus_28
(holin)

Phegasus_29

Phegasus_30
(tyrosine integrase)

Phegasus_31
(immunity repressor)

Phegasus_32
(excise)

Phegasus_33

Phegasus_34
(antirepressor)

Phegasus_35

Phegasus_36

Phegasus_37

Phegasus_38

Phegasus_39

Phegasus_40

Phegasus_41

Phegasus_42

Phegasus_43

Phegasus_44

Phegasus_45

Phegasus_46
(RecB-like exonuclease/helicase)

Phegasus_47
(RecT-like DNA pairing protein)

Phegasus_48

Phegasus_49
(FtsK-like DNA translocase)

Phegasus_50
(RusA-like resolvase)

Phegasus_51

Phegasus_52

Phegasus_53

Phegasus_54
(DpdA-like tRNA-guanine transglycosylase)

Phegasus_55

Phegasus_56
(helix-turn-helix DNA binding domain protein)

Phegasus_57

Phegasus_58

Phegasus_59

Phegasus_60

Phegasus_61
(helix-turn-helix DNA binding domain protein)

Phegasus_62

Phegasus_63
(DNA methylase)

Phegasus_64

Phegasus_65
(RepA-like replication initiator)

Phegasus_66

Phegasus_67

Phegasus_68
(helix-turn-helix DNA binding domain protein)

Phegasus_69

Phegasus_70

Phegasus_71

Phegasus_72

Phegasus_73

Phegasus_74

Phegasus_75

Phegasus_76

Phegasus_77
(ribbon-helix-helix DNA binding domain protein)

Phegasus_78

Phegasus_79

Phegasus_80

Phegasus_81
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON637760
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload