Gordonia phage Shelley
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Detailed Information for Phage Shelley
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAnnie Robles, Lainey Kull, Ricky Thompson, Kya Fox
Year Found2021
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4457 N, 79.9578 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage494
Genome length (bp)72848
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length207 bp
GC Content59.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSmall, circular, lytic, not hazy, very clear.
Number of Genes92
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Shelley_1

Shelley_2
(DNA helicase)

Shelley_3

Shelley_4

Shelley_5
(DNA primase)

Shelley_6

Shelley_7
(terminase)

Shelley_8
(portal protein)

Shelley_9
(minor tail protein)

Shelley_10

Shelley_11
(capsid maturation protease)

Shelley_12
(capsid decoration protein)

Shelley_13
(major capsid protein)

Shelley_14

Shelley_15

Shelley_16
(head-to-tail adaptor)

Shelley_17

Shelley_18

Shelley_19

Shelley_20
(major tail protein)

Shelley_21 — tRNA
(tRNA-Asn(gtt))

Shelley_22
(tail assembly chaperone)

Shelley_23
(tail assembly chaperone)

Shelley_24
(tape measure protein)

Shelley_25
(minor tail protein)

Shelley_26
(minor tail protein)

Shelley_27
(minor tail protein)

Shelley_28

Shelley_29

Shelley_30

Shelley_31

Shelley_32

Shelley_33

Shelley_34

Shelley_35
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

Shelley_36
(lysin A, protease M23 domain)

Shelley_37

Shelley_38

Shelley_39

Shelley_40

Shelley_41
(Cas4 family exonuclease)

Shelley_42
(WhiB transcription factor)

Shelley_43

Shelley_44

Shelley_45

Shelley_46
(DNA methyltransferase)

Shelley_47

Shelley_48

Shelley_49
(MazG-like nucleotide pyrophosphohydrolase)

Shelley_50
(RusA-like resolvase)

Shelley_51
(nucleoside deoxyribosyltransferase)

Shelley_52
(DNA polymerase III sliding clamp beta)

Shelley_53

Shelley_54
(DnaQ-like DNA polymerase III subunit)

Shelley_55
(MerR-like helix-turn-helix DNA binding domain protein)

Shelley_56

Shelley_57
(DNA helicase)

Shelley_58

Shelley_59

Shelley_60

Shelley_61
(MerR-like helix-turn-helix DNA binding domain protein)

Shelley_62

Shelley_63

Shelley_64

Shelley_65

Shelley_66

Shelley_67

Shelley_68

Shelley_69

Shelley_70

Shelley_71

Shelley_72

Shelley_73

Shelley_74

Shelley_75

Shelley_76

Shelley_77

Shelley_78

Shelley_79

Shelley_80

Shelley_81
(CobT-like cobalamin biosynthesis protein)

Shelley_82
(AAA-ATPase)

Shelley_83

Shelley_84

Shelley_85

Shelley_86

Shelley_87

Shelley_88

Shelley_89

Shelley_90

Shelley_91

Shelley_92

Shelley_93

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970582
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# G8
Available Files
GenBank File for PhameratorDownload