Detailed Information for Phage Speedwell |
Discovery Information |
Isolation Host | Streptomyces bicolor NRRL B-3897 |
Found By | Anjali Ganti |
Year Found | 2024 |
Location Found | Flower Mound, TX United States |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.05572 N, 97.09381 W Map |
Discovery Notes | Got soil sample from (33.05572°N, 97.09381°W) in north western Flower Mound, Texas. (My backyard) on 1/21/24. The temperature was 37° at 7:55 pm. The location was near some flower bushes, where the flower and leaves had wilted. I scraped off a little topsoil then took about two spoonful's of soil and placed them in a plastic bag. |
Naming Notes | Named after the plant I took the soil sample from. It's scientific name is Veronica, but I thought Speedwell was cuter. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 2, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 5727 |
Genome length (bp) | 49789 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGTACGTGAT |
GC Content | 65.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of North Texas |
Annotation Status | QC Complete |
Plaque Notes | Small, clear and circular plaques. 0.5mm to 1mm diameter. |
Morphotype | Siphoviridae |
Number of Genes | 82 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |