Detailed Information for Phage StevieRay |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Isavannah Reyes |
Year Found | 2015 |
Location Found | Austin, TX USA |
Finding Institution | St. Edward's University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 30.26315 N, 97.75077 W Map |
Naming Notes | Phage was found on a riverbank behind the Stevie Ray Vaughan statue, so the phage was named after him. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 528 |
Genome length (bp) | 48815 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | CCTGCCGCCCGA |
GC Content | 66.9% |
Sequencing Notes | A small percentage of reads (~7%) in this project matched a different phage, a Cluster A. It's assumed this was a minor contaminant. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | P |
Subcluster | P1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 81 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MF373843 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
25 |
Pitt Freezer Box Grid# |
B12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |