Detailed Information for Phage Sue2 |
Discovery Information |
Isolation Host | Arthrobacter atrocyaneus NRRL B-2883 |
Found By | Nathan Stettin |
Year Found | 2023 |
Location Found | Elmhurst, IL United States Of America |
Finding Institution | Baylor University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 32°C |
GPS Coordinates | 41.881132 N, 87.923636 W Map |
Discovery Notes | Sue2 was found in the backyard of Nathan Stettin at a temperature ranging from 70-80 F on a rainy day. The soil had a pH of 5. The area it was collected from had an immense amount of mulch. It was extracted 3 inches under ground and the soil is Sandy Loam. |
Naming Notes | The phage name is named after my grandma Sue Anibal. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 772 |
Genome length (bp) | 42245 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGGGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AZ |
Subcluster | AZ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Baylor University |
Annotation Status | In GenBank |
Plaque Notes | The phage was imaged at Baylor University using the Spectra 300C (TEM). The tail length was confirmed at 108.7 nm and head diameter is 48.7nm. |
Morphotype | Siphoviridae |
Number of Genes | 67 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ114743 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
185 |
Pitt Freezer Box Grid# |
A2 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |