| Detailed Information for Phage Turab | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis NRRL B-2880 |
| Found By | Gabriella Azab and Verina Anis |
| Year Found | 2023 |
| Location Found | Old Westbury, NY United States |
| Finding Institution | SUNY Old Westbury |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.7975 N, 73.5725 W Map |
| Discovery Notes | The soil was collected in the garden near the natural science building at SUNY Old Westbury, was full of organic matter and it was fertilized soil. There were wood chips on top, and we cleared them out to collect the sample. |
| Naming Notes | We named our phage Turab because it means dirt in Arabic, التراب, which was the origin of our phage sample. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 37519 |
| Genome length (bp) | 43119 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAAGGGGCAT |
| GC Content | 66.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AZ |
| Subcluster | AZ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAinMach (None) Exile (None) Soondubu (None) Adolin (AZ1) Adumb2043 (AZ1) AEgle (AZ1) AGrandiflora (AZ1) Amyev (AZ1) Asa16 (AZ1) Ascela (AZ1) Berrie (AZ1) Cassia (AZ1) Community (AZ1) Crewmate (AZ1) Cyan (AZ1) DrManhattan (AZ1) DrSierra (AZ1) Elezi (AZ1) Eraser (AZ1) Iter (AZ1) IttyBittyPiggy (AZ1) Janeemi (AZ1) Joemato (AZ1) JohnDoe (AZ1) Jstan (AZ1) JuneStar (AZ1) Kaylissa (AZ1) KeAlii (AZ1) Lego (AZ1) Lizalica (AZ1) London (AZ1) MissSwiss (AZ1) Mudpuppy (AZ1) Niobe (AZ1) Nitro (AZ1) ObiToo (AZ1) Phives (AZ1) Pixelle (AZ1) Powerpuff (AZ1) Pumpkins (AZ1) Reedo (AZ1) Simpson (AZ1) Sue2 (AZ1) Tallboi (AZ1) Tbone (AZ1) TforTroy (AZ1) Tian (AZ1) Tuck (AZ1) Turab (AZ1) Tutumahutu (AZ1) VResidence (AZ1) Warda (AZ1) Wildwest (AZ1) Yang (AZ1) YesChef (AZ1) Liebe (AZ2) MaGuCo (AZ2) Maureen (AZ2) Snek (AZ3) Tweety19 (AZ3) Emotion (AZ4) JasmineDragon (AZ4) MiniMommy (AZ4) ShakeItOph (AZ4) VroomVroom (AZ4) Ashes (AZ5) Cappuccino (AZ5) Donkey (AZ5) Gambol (AZ5) Halsey (AZ5) Kalimba (AZ5) Moss (AZ5) Mysterium (AZ5) Sooty (AZ5) SpecialK (AZ5) |
| Annotating Institution | SUNY Old Westbury |
| Annotation Status | Being Annotated (Expected completion by 12/10/2024) |
| Plaque Notes | We have identified one morphology of a plaque associated with the lytic cycle. One morphology consistent in each plaque. This morphology is characterized by circular, clear plaques with a well-defined, transparent border observed on the agar plates. The diameter of our plaques was 3.6 ± 0.55 mm. The titer that we eventually calculated was 2.52 x 10^10 PFU/mL from our 10-6 plate. |
| Number of Genes | 68 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTurab_1 Turab_2 Turab_3 Turab_4 Turab_5 Turab_6 Turab_7 Turab_8 Turab_9 Turab_10 Turab_11 Turab_12 Turab_13 Turab_14 Turab_15 Turab_16 Turab_17 Turab_18 Turab_19 Turab_20 Turab_21 Turab_22 Turab_23 Turab_24 Turab_25 Turab_26 Turab_27 Turab_28 Turab_29 Turab_30 Turab_31 Turab_32 Turab_33 Turab_34 Turab_35 Turab_36 Turab_37 Turab_38 Turab_39 Turab_40 Turab_41 Turab_42 Turab_43 Turab_44 Turab_45 Turab_46 Turab_47 Turab_48 Turab_49 Turab_50 Turab_51 Turab_52 Turab_53 Turab_54 Turab_55 Turab_56 Turab_57 Turab_58 Turab_59 Turab_60 Turab_61 Turab_62 Turab_63 Turab_64 Turab_65 Turab_66 Turab_67 Turab_68 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2.53 x 10^10 PFU/mL |
| Pitt Freezer Box# | 172 |
| Pitt Freezer Box Grid# | A3 |