| Detailed Information for Phage Xavia |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Stephon Scott |
| Year Found | 2017 |
| Location Found | Atlanta, GA USA |
| Finding Institution | Morehouse College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.748146 N, 84.416764 W Map |
| Discovery Notes | The water in which my bacteriophage was discovered was very dirty and murky.
Cluster specific PCR primers indicated Cluster P1. |
| Naming Notes | Xavia means "bright, splendid; new house." Considering the fact that I messed up on this experiment which set me back, I️ was determined to not give up. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 9, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Genome length (bp) | 49808 |
| Character of genome ends | Unknown |
| Overhang Length | 12 bases |
| Overhang Sequence | CCTGCCGCCCGA |
| GC Content | 65.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | P |
| Subcluster | P3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Morehouse College |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 71 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH230879 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
47 |
| Pitt Freezer Box Grid# |
G6 |
| Available Files |
| GenBank File for Phamerator | Download |