Detailed Information for Phage Amela |
Discovery Information |
Isolation Host | Streptomyces venezuelae ATCC 10712 |
Found By | Ryan Hemenway |
Year Found | 2014 |
Location Found | Frisco, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.140588 N, 96.832041 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 18, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2242 |
Genome length (bp) | 49452 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGTACGTGAT |
End Determination Notes | Buildup of reads 11 bp apart in Illumina shotgun data. Similarity to Sujidade, Zemlya, and Lika also helps. |
GC Content | 65.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Number of Genes | 75 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KT186228 |
Refseq Number | None yet |
Published in Paper | Layton et al 2016, Genome Announcements: Genome Sequences of Streptomyces Phages Amela and Verse |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
36 |
Pitt Freezer Box Grid# |
A4 |