| Detailed Information for Phage Berries |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Allison Redhair and Dasha Nesterova |
| Year Found | 2021 |
| Location Found | Pittsburgh, PA United States of America |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.2652 N, 79.5735 W Map |
| Discovery Notes | Soil collected at 9:22 pm on 8/31/2021. Soil collected from about 2 inches under the surface. The soil was moist from an earlier rainstorm and there was lots of plant material present in the soil. Soil surrounded by small leafy bushes and plants. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 25, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1262 |
| Genome length (bp) | 73543 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 161 bp |
| GC Content | 59.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Number of Genes | 92 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978880 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
141 |
| Pitt Freezer Box Grid# |
A7 |
| Available Files |
| GenBank File for Phamerator | Download |