Detailed Information for Phage Emaanora |
Discovery Information |
Isolation Host | Streptomyces lividans JI 1326 |
Found By | Nora Doughty, Emaan Sayied |
Year Found | 2023 |
Location Found | St. Louis, MO USA |
Finding Institution | Washington University in St. Louis |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 33°C |
GPS Coordinates | 38.63966 N, 90.29344 W Map |
Discovery Notes | Sample collected on September 4th 2023 at around 3:26pm on Art Hill in Forest Park, St. Louis, MO, USA. Soil sample was obtained from a muddy patch of grass and contained some clay. Dug about 3cm deep. |
Naming Notes | Combination of names - Emaan and Nora |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 20, 2024 |
Sequencing Facility | The McDonnell Genome Institute at Washington University |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 379 |
Genome length (bp) | 51507 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGCCAGTGAT |
GC Content | 65.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BD |
Subcluster | BD1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Washington University in St. Louis |
Annotation Status | In GenBank |
Plaque Notes | Very large, clear plaques |
Morphotype | Siphoviridae |
Number of Genes | 76 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978833 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
1 x 10^10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |