Gordonia phage FelixAlejandro
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Detailed Information for Phage FelixAlejandro
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAbygail Paseos
Year Found2016
Location FoundNew York City, NY USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.65583 N, 74.0083 W Map
Discovery NotesTook soil from a medium sized cementplanter outside of a large warehouse in Brooklyn

Light snow
Naming NotesFamily names
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 7, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1527
Genome length (bp)77553
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length201 bp
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and less than or equal to 1mm in diameter

MorphotypeSiphoviridae
Number of Genes107
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

FelixAlejandro_1

FelixAlejandro_2

FelixAlejandro_3

FelixAlejandro_4

FelixAlejandro_5

FelixAlejandro_6

FelixAlejandro_7

FelixAlejandro_8

FelixAlejandro_9
(DNA primase)

FelixAlejandro_10

FelixAlejandro_11
(terminase)

FelixAlejandro_12
(portal protein)

FelixAlejandro_13
(minor tail protein)

FelixAlejandro_14

FelixAlejandro_15
(capsid maturation protease)

FelixAlejandro_16
(capsid decoration protein)

FelixAlejandro_17
(major capsid protein)

FelixAlejandro_18

FelixAlejandro_19

FelixAlejandro_20
(head-to-tail adaptor)

FelixAlejandro_21

FelixAlejandro_22

FelixAlejandro_23

FelixAlejandro_24
(major tail protein)

FelixAlejandro_25 — tRNA

FelixAlejandro_26
(tail assembly chaperone)

FelixAlejandro_27
(tail assembly chaperone)

FelixAlejandro_28
(tape measure protein)

FelixAlejandro_29
(minor tail protein)

FelixAlejandro_30
(minor tail protein)

FelixAlejandro_31
(minor tail protein)

FelixAlejandro_32

FelixAlejandro_33

FelixAlejandro_34

FelixAlejandro_35

FelixAlejandro_36

FelixAlejandro_37

FelixAlejandro_38

FelixAlejandro_39
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

FelixAlejandro_40
(lysin A, protease M23 domain)

FelixAlejandro_41

FelixAlejandro_42

FelixAlejandro_43

FelixAlejandro_44

FelixAlejandro_45
(Cas4 family exonuclease)

FelixAlejandro_46

FelixAlejandro_47

FelixAlejandro_48

FelixAlejandro_49

FelixAlejandro_50

FelixAlejandro_51
(DNA methylase)

FelixAlejandro_52

FelixAlejandro_53

FelixAlejandro_54
(lysin B)

FelixAlejandro_55
(MazG-like nucleotide pyrophosphohydrolase)

FelixAlejandro_56

FelixAlejandro_57
(RusA-like resolvase)

FelixAlejandro_58

FelixAlejandro_59
(DNA polymerase III sliding clamp)

FelixAlejandro_60

FelixAlejandro_61
(DnaQ-like DNA polymerase III subunit)

FelixAlejandro_62
(helix-turn-helix DNA binding protein)

FelixAlejandro_63

FelixAlejandro_64
(DNA helicase)

FelixAlejandro_65

FelixAlejandro_66

FelixAlejandro_67

FelixAlejandro_68
(helix-turn-helix DNA binding protein)

FelixAlejandro_69

FelixAlejandro_70

FelixAlejandro_71

FelixAlejandro_72

FelixAlejandro_73

FelixAlejandro_74

FelixAlejandro_75

FelixAlejandro_76

FelixAlejandro_77

FelixAlejandro_78

FelixAlejandro_79

FelixAlejandro_80

FelixAlejandro_81

FelixAlejandro_82

FelixAlejandro_83

FelixAlejandro_84

FelixAlejandro_85

FelixAlejandro_86
(HNH endonuclease)

FelixAlejandro_87

FelixAlejandro_88

FelixAlejandro_89

FelixAlejandro_90

FelixAlejandro_91
(CobT-like cobalamin biosynthesis protein)

FelixAlejandro_92
(AAA-ATPase)

FelixAlejandro_93

FelixAlejandro_94

FelixAlejandro_95

FelixAlejandro_96

FelixAlejandro_97

FelixAlejandro_98

FelixAlejandro_99

FelixAlejandro_100

FelixAlejandro_101

FelixAlejandro_102

FelixAlejandro_103

FelixAlejandro_104

FelixAlejandro_105

FelixAlejandro_106

FelixAlejandro_107

FelixAlejandro_108

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK433263
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.15x10^10
Date of SEA Lysate Titering Feb 22, 2016
Pitt Freezer Box# 3
Pitt Freezer Box Grid# D4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload