Streptomyces phage Hippo
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Detailed Information for Phage Hippo
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByMandy Feenstra and Rylan Gottron
Year Found2019
Location FoundSt. Louis, MO United States
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates38.634444 N, 90.292222 W Map
Discovery NotesCollected at St. Louis Zoo by the Hippo Enclosure
Soil is wet and claylike
Lots of organic matter, detritus
Collected 2 cm deep
Naming NotesNamed "Hippo" after the location the phage was found (hippo enclosure at St. Louis Zoo)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 15, 2020
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage93
Genome length (bp)51566
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGCCAGTGAT
GC Content65.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Cluster Life CycleTemperate
Other Cluster Members

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Aaronocolus (BD1)

Asten (BD1)

BarryBee (BD1)

BeardedLady (BD1)

Bovely (BD1)

Brataylor (BD1)

BryanRecycles (BD1)

Caliburn (BD1)

Celeste (BD1)

Chucky (BD1)

Danzina (BD1)

Dattran (BD1)

Dwayne (BD1)

Eddasa (BD1)

Ejemplo (BD1)

Emaanora (BD1)

EnochSoames (BD1)

Esperer (BD1)

Goby (BD1)

Godpower (BD1)

Hippo (BD1)

Hydra (BD1)

Indigo (BD1)

Izzy (BD1)

Jash (BD1)

Katalie (BD1)

Lannister (BD1)

Legacy (BD1)

Leviticus (BD1)

Lika (BD1)

Lorelei (BD1)

Maneekul (BD1)

Nabi (BD1)

Nanodon (BD1)

Nerdos (BD1)

Oliynyk (BD1)

Ozzie (BD1)

OzzyJ (BD1)

Phettuccine (BD1)

Rana (BD1)

RedBear (BD1)

Rusticus (BD1)

SarahRose (BD1)

Snorlax (BD1)

South40 (BD1)

Sujidade (BD1)

SunsetPointe (BD1)

TagePhighter (BD1)

Toma (BD1)

Triste (BD1)

TuanPN (BD1)

Unstoppable (BD1)

Werner (BD1)

Whatever (BD1)

Yasdnil (BD1)

Zemlya (BD1)

Alvy (BD2)

Amethyst (BD2)

Andris (BD2)

Animus (BD2)

BartholomewSD (BD2)

Bowden (BD2)

Caelum (BD2)

Daudau (BD2)

Diane (BD2)

ELB20 (BD2)

GirlDinner (BD2)

Haizum (BD2)

Hank144 (BD2)

Issmi (BD2)

Janus (BD2)

Jevington (BD2)

Loofah (BD2)

Marav (BD2)

Nishikigoi (BD2)

Omar (BD2)

Pablito (BD2)

Paedore (BD2)

Paolo (BD2)

Puginator (BD2)

R4 (BD2)

SqueakyClean (BD2)

Superstar (BD2)

Tefunt (BD2)

Thestral (BD2)

TinaBelcher (BD2)

Triumph (BD2)

TrvxScott (BD2)

Zainub (BD2)

Alsaber (BD3)

Amela (BD3)

Celery (BD3)

Conan (BD3)

Dexers (BD3)

ElGato (BD3)

Kaine (BD3)

Pavo (BD3)

phiCAM (BD3)

Provolone (BD3)

Saftant (BD3)

Speedwell (BD3)

Vanseggelen (BD3)

Verabelle (BD3)

Verse (BD3)

Yosif (BD3)

BroPlease (BD4)

GreenWeasel (BD4)

phiHau3 (BD4)

StrepC (BD5)

Celia (BD6)

Itza (BD6)

Urza (BD6)

VieEnRose (BD6)

Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque NotesClear, uniform and medium sized plaques
Number of Genes73
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Hippo_1

Hippo_2
(HNH endonuclease)

Hippo_3

Hippo_4
(thioredoxin)

Hippo_5
(terminase small subunit)

Hippo_6
(terminase large subunit)

Hippo_7
(portal protein)

Hippo_8

Hippo_9
(scaffolding protein)

Hippo_10
(major capsid protein)

Hippo_11
(head-to-tail adaptor)

Hippo_12
(head-to-tail stopper)

Hippo_13

Hippo_14
(tail terminator)

Hippo_15
(major tail protein)

Hippo_16
(tail assembly chaperone)

Hippo_17
(tail assembly chaperone)

Hippo_18
(tape measure protein)

Hippo_19
(minor tail protein)

Hippo_20
(minor tail protein)

Hippo_21

Hippo_22

Hippo_23
(tail fiber)

Hippo_24

Hippo_25
(endolysin)

Hippo_26

Hippo_27
(DNA binding protein)

Hippo_28
(immunity repressor)

Hippo_29

Hippo_30
(exonuclease)

Hippo_31

Hippo_32

Hippo_33

Hippo_34
(deoxycytidylate deaminase)

Hippo_35
(DnaB-like dsDNA helicase)

Hippo_36
(holliday junction resolvase)

Hippo_37

Hippo_38
(DNA primase)

Hippo_39
(DNA primase)

Hippo_40

Hippo_41

Hippo_42
(RNA polymerase sigma factor)

Hippo_43
(phosphoesterase)

Hippo_44

Hippo_45
(DNA binding protein)

Hippo_46

Hippo_47
(ribonucleotide reductase)

Hippo_48
(methyltransferase)

Hippo_49

Hippo_50
(serine integrase)

Hippo_51
(ThyX-like thymidylate synthase)

Hippo_52

Hippo_53

Hippo_54
(DnaE-like DNA polymerase III alpha)

Hippo_55

Hippo_56

Hippo_57

Hippo_58
(deoxynucleoside monophosphate kinase)

Hippo_59

Hippo_60

Hippo_61

Hippo_62

Hippo_63

Hippo_64

Hippo_65
(HNH endonuclease)

Hippo_66

Hippo_67
(OCR-like antirestriction protein)

Hippo_68

Hippo_69

Hippo_70

Hippo_71

Hippo_72

Hippo_73
(acetyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW365951
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 3.7 x 10^10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload