| Detailed Information for Phage Hollow |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Audrey Cronin and Jill Paciga |
| Year Found | 2021 |
| Location Found | Pittsburgh, PA United States of America |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.437799 N, 79.946214 W Map |
| Discovery Notes | We discovered this phage at the bank of Phipps Run creek at Schenley Park. |
| Naming Notes | We named this phage "Hollow" because we discovered it at Panther Hollow Trail, Schenley Park. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1293 |
| Genome length (bp) | 75413 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 1185 bp |
| GC Content | 59.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are small, less than 1mm in diameters. They are round, but not perfectly circular. When spot tested, mesas formed in the spots, indicating a temperate phage. |
| Number of Genes | 100 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP434448 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
141 |
| Pitt Freezer Box Grid# |
E5 |
| Available Files |
| GenBank File for Phamerator | Download |