| Detailed Information for Phage Katyusha |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Philipp Koman |
| Year Found | 2015 |
| Location Found | Oakland, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.442674 N, 79.957008 W Map |
| Discovery Notes | Found in soil outside of Litchfield Towers Residence Halls at the University of Pittsburgh in a flower bed. Soil was kept in a plastic Zip-Lock bag for 20 minutes prior to being used for a direct plate. Soil was moist, fluffy, and fertile. Weather was warm (20-24 degrees Celsius) and humid. |
| Naming Notes | My moms name is Katerina and she is a biologist. My family is Russian so Katya is short for Katerina and Katyusha is the familiar of Katya. I thought my mom would be happy that my first step in the field of biology would be in her honor. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 16, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1419 |
| Genome length (bp) | 75380 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 1172 bp |
| GC Content | 59.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques were quite numerous and very small, about 1mm diameter. Sizes ranged from about .5mm to 1.5mm. Some contamination was present on the plate, but not enough to make the plate unusable. |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU963258 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
2 |
| Pitt Freezer Box Grid# |
F8 |
| Available Files |
| Plaque Picture | Download |
| Final DNAMaster File | Download |
