| Detailed Information for Phage Lahirium |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Rajat K. Lahiri |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 4°C |
| GPS Coordinates | 40.445314 N, 79.961672 W Map |
| Discovery Notes | Phage Lahirium was discovered on August 28th, 2016. The weather was Sunny, 94 degrees Fahrenheit, and 87% Humidity Phage Lahirium was found in a soil sample that was black, slightly damp, and 1-2 inches below surface. |
| Naming Notes | Phage Lahirium is named after its discoverer, Rajat K. Lahiri. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 10, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1114 |
| Genome length (bp) | 73885 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 184 bp |
| GC Content | 59.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Plaque Notes | The plaque morphology of Lahirium is very clear, circular, and have diameters of ~1mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 91 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK494109 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Date of SEA Lysate Titering |
Oct 5, 2016 |
| Pitt Freezer Box# |
42 |
| Pitt Freezer Box Grid# |
E12 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
