Arthrobacter phage Phives
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Detailed Information for Phage Phives
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found ByBJE, RJB
Year Found2019
Location FoundOld Westbury, NY United states
Finding InstitutionNew York Institute of Technology
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.813139 N, 73.604667 W Map
Discovery Notesin moist soil
Naming Notestook us 5 times to get the proper plate titer
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2651
Genome length (bp)44204
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAAGGGGCAT
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAZ
SubclusterAZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNew York Institute of Technology
Annotation StatusIn GenBank
Plaque NotesBullseye morphology
MorphotypeSiphoviridae
Number of Genes69
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Phives_1
(endolysin)

Phives_2
(terminase small subunit)

Phives_3
(terminase large subunit)

Phives_4
(portal protein)

Phives_5
(capsid maturation protease and VIP2-like ADP-ribosyltransferase toxin)

Phives_6

Phives_7
(scaffolding protein)

Phives_8
(major capsid protein)

Phives_9
(head-to-tail adaptor)

Phives_10

Phives_11
(head-to-tail stopper)

Phives_12

Phives_13
(tail terminator)

Phives_14
(major tail protein)

Phives_15
(tail assembly chaperone)

Phives_16
(tail assembly chaperone)

Phives_17
(tape measure protein)

Phives_18
(minor tail protein)

Phives_19
(minor tail protein)

Phives_20
(minor tail protein)

Phives_21
(minor tail protein)

Phives_22

Phives_23

Phives_24

Phives_25

Phives_26
(deoxynucleoside monophosphate kinase)

Phives_27

Phives_28
(exonuclease)

Phives_29

Phives_30
(nucleoside deoxyribosyltransferase)

Phives_31
(LAGLIDADG endonuclease)

Phives_32
(recombination directionality factor)

Phives_33

Phives_34

Phives_35
(NrdH-like glutaredoxin)

Phives_36

Phives_37

Phives_38
(holliday junction resolvase)

Phives_39

Phives_40
(DNA primase/helicase)

Phives_41

Phives_42

Phives_43
(DNA polymerase I)

Phives_44

Phives_45
(DNA ligase)

Phives_46

Phives_48
(DNA binding protein)

Phives_49
(G-I-Y Y-I-G endonuclease)

Phives_50
(DNA binding protein)

Phives_51
(SprT-like protease)

Phives_52

Phives_53

Phives_54
(serine integrase)

Phives_55

Phives_56
(RNA binding protein)

Phives_57

Phives_58

Phives_59

Phives_60

Phives_61

Phives_62

Phives_63

Phives_64

Phives_65

Phives_66

Phives_67

Phives_68

Phives_69

Phives_70
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889376
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 130
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload