| Detailed Information for Phage Sombrero |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Connor Roan |
| Year Found | 2017 |
| Location Found | Ruston, LA USA |
| Finding Institution | University of Louisiana at Monroe |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.53122 N, 92.65086 W Map |
| Discovery Notes | It was soil near a walkway on Louisiana Tech's campus, near the Caruther's apartments, near the recreation center. It was dark dirt. |
| Naming Notes | The spot of the filtrate looks like a sombrero. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 839 |
| Genome length (bp) | 76485 |
| Character of genome ends | Direct Terminal Repeat |
| Overhang Length | 201 bases |
| GC Content | 59.0% |
| Sequencing Notes | at position 39347 bp approximately 20% of reads contain a T instead of consensus G
at position 43529 bp approximately 20% of reads contain an A instead of consensus G |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CS |
| Subcluster | CS2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Louisiana at Monroe |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 108 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK359302 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
59 |
| Pitt Freezer Box Grid# |
D8 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
